Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00298 ATGGCAGGAACTGTAATGGCAGCCAATGGTAGCTCCACTGTTCTCAGAAATACCCCATTCTTGGGTCAAAACAGAGCATCTAGCTCTCACTCTCTCAGAGATGTTGTTTCCATGGGGAATGGAAAGTACTCCATGGGTCTTGACTTGTGGTATGGACCAGACAGAGTGAAGTACTTGGGACCATTTTCGGCTCAGACCCCCTCATATCTCACCGGAGAATTTCCCGGTGACTATGGTTGGGACACCGCCGGACTATCTGCCGATCCAGAGGCATTCGCCAAGAACAGAGCACTTGAGGTAATCCACAGCAGGTGGGCGATGCTCGGAGCACTCGGATGCATAACCCCGGAAGTTCTCCAGAAATGGCTCAATGTAAACTTCAAAGAGGCAGTCTGGTTCAAAGCAGGATCACAAATCTTCACAGAAGGAGGATTAGACTATCTCGGAAACCCGAATCTCGTTCATGCCCAGAGCATCCTCGCCATTCTCGGCTCTCAAGTAATTCTAATGGGTCTAGTCGAAGGTTACCGCATCAATGGCTTAGACGGAGTAGGCGAAGGAAACGACCTCTACCCGGGTGGCCAATATTTTGACCCACTTGGTCTGGCTGATGATCCAGTCACTTTCCAAGAGCTCAAAGTGAAAGAAATCAAAAATGGCCGCCTGGCAATGTTCTCCATGTTTGGATTCTTTGTCCAAGCCATTGTTACAGGAAAAGGTCCTCTGGAGAACCTCCTCGACCACCTTGACAACCCAGTTGCTAATAATGCTTGGGTTTATGCCACAAAATTCGCACCTGGATCATAA 807 48.95 MAGTVMAANGSSTVLRNTPFLGQNRASSSHSLRDVVSMGNGKYSMGLDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALGCITPEVLQKWLNVNFKEAVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAILGSQVILMGLVEGYRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFQELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 268
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3713353 3790091 + Bma030652 Bma14g00298 94279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00298 268 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 8 268 IPR001344 GO:0009765|GO:0016020
Bma14g00298 268 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 8 268 - -
Bma14g00298 268 Pfam Chlorophyll A-B binding protein 67 234 IPR022796 -
Bma14g00298 268 Gene3D Chlorophyll a/b binding protein domain 57 261 - -
Bma14g00298 268 SUPERFAMILY Chlorophyll a-b binding protein 49 265 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00979 Bma-Chr6:46356508 Bma14g00298 Bma-Chr14:3713353 3.85E-65 dispersed
Bma07g01333 Bma-Chr7:48866479 Bma14g00298 Bma-Chr14:3713353 4.90E-147 dispersed
Bma14g00298 Bma-Chr14:3713353 Bma02g01306 Bma-Chr2:55191335 3.53E-127 dispersed
Bma14g00298 Bma-Chr14:3713353 Bma12g00859 Bma-Chr12:39396188 7.18E-128 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00298 K08914 - gmx:100779387 495.352