Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00299 ATGATGTTAGCCTCGTTACCTTCTACAATTGCACGGAGCTCGCTGGAGGTAATGCTGGATTCTCTCAGGCGGAGAGACGATAATGACAAGGATAAGGACTTGCCTCCGGCACTGCCAGTTCGGCCTAACTCAAAGGGTCGTCTTCCTCCAGCTAGGAGGTCCTTTCCCATCGATTTCAAGGTGGGCGATGAGGGTATTCCACAGTGCTCCGTCAGTGAGCTTCATGGGAAAGAAGAAACAAAAAGGAAAGAGAAAGATTTTGAAAGCAGGAAAGGTAGCTTTGGAAGTAAAAGGATGAAGAAAGATCAAAATGAAGAATCGCCTTATGCTATAGCTCTAGAAAACTGCAGAAATGATTATATGGAGGAATCTAATGGCGCTGCTGCTTCACCGGATAATGTTGGAGATTCAGAGTGGGATGACAACGTTGGCTATTTCATTAAGAAGAAACTCCTTGTTTGGTGTCCCCTCCCAAATGGAAAGTGGGAACCAGGAACTATACAATCAAGTACAGAGGAAGAAGCGGTTGTTCTTCTCTCAAAGGGGGAAGTTATGAAAGTCTCTACAGTGCAGCTTGTACCTGCTAACCCAGCTATCTTGGAAGGAGTTGATGATCTCATACAACTTAGTTATTTAAACGAGCCATCGGTTGTTCACAACCTCCGGCAGAGATTTTCTCAAGATAAGATCTATAGTAAGGCAGGGCCAGTATTGATTGCAATCAATCCCTTCAAAGATGTTGGTTGTAATGGAAATGATGTTGTTATGGCATATCAACAGAAGCTTGTTGACAGTCCTCATATTTATGCCACAACAGACACAGCCTATAACCAGATGATGTCAGATGGGATCAATCAATCCATTATCATAAGTGGAGAAAGTGGAGCTGGGAAAACTGAGACGGCAAAAGTTGCCATGCAATACTTGGCTTCTCTAGGTGGTGGAAGTTTAGGGCTGGAGGATGGAATACTGCAAACAAATTATATACTGGAAGCATTTGGAAATGCTAAAACATCGAGGAATAATAACTCCAGTCGATTTGGCAAGTTGATTGAAATTCATTTTAGTACACTTGGGAAGATTTGTGGGGCAAAAATCCAAACTTTTTTGTTGGAAAAGTCAAGGGTGGCTCAGCTGGCCCAAGGCGAGAGGTCGTACCATATCTTTTATCAACTTTGTGCCGGAGCCCCATCACTTCTTAAAGGGAGACTGAACCTCAAGGATGCCTGGGAGTACAAGTATCTCAATCAAAGTGAGTGCATAGTGATTGATGGTGTTGATGATGCACGAAAATTTAATATTCTCGAGGAAGCTCTAGACACCATTCAAATCTGCAAAGAGGATCAAGAAAATGCATTTTCTATGCTTGTTGCAATTTTATGGCTTGGCAACATCTCATTTAAAGCAATTGATTCTGAAAATCGAGTGGAGGTGGTGGCTGATGAAGCTCTATTGAGTGCAGCAAAGCTAATGGGTTGCAGTTCCGAGGAGCTTATGTTAGTTTTATCGACCCAAAATATTAAAGCTGGAAAGGATACCATAGCCAAAAAGTTGACTTTGCGTCAGGCGATGGACACAAGAGATGCATTAGCGAAGTTTATCTATTCAAACTTGTTTGACTGGCTTGGAGAACAAATTAACAAGTCACTTGCCGTGGGAAAACGTTGTACTGAAAGATCTATAAGTATTCTTGATATTTATGGGTTTGAGTCATTTAAGAAAAATAGCTTTGAACAATTTTGTATAAATTATGCCAATGAGAGGCTGCAACAGCATTTTAACCGGCATCTGTTTAAACTTGAGCAGGAGGACTATGAAGTGGATGGAATTGATTGGACTGAAGTTAATTTTGAAGACAACCAAGAGTGTTTAAATCTCATTGAGAAGAAACCTCTAGGTATTCTAGCTTTGTTAGATGAGGAATCAAAGTTCCCTAATGCTACTGATCTTACATTTGCCAACAAACTTAAGCATCATTTGAATGGGAATTCTTGCTTTAAAGGCGAAAGAGGCAGGGCCTTTGGTGTTCATCATTATGCTGGAGAGGTTGTATATGATACAAACGGATTTCTGGAGAAGAATAGAGATCCATTGCCCTCTGAATCCATTCAGTTCCTTTCGTCATGTAGCTCCAAATTACTACAGTTGTTTGCCTCAAAAGTACTTACCCAGGAAGCAGCAGTTTCTCAATACCATATGGGTACTTTAGAATCTCACAAGCAGAGTGTTGGTGCAAAGTTCAAGATTGGGGCTTTGGAAGAAAAAAGGAAACAGATTCTGAATGGGATTGTTGGGTTGCAAAAATTCTTTCGAGGAAACCTTGCACGACGTCATTTCCACGACCTTAGGAATGCAGCCATGACACTACAATCATGTAATATGCTTTATCACTTATTTTTTAAGAGCTACGCTATTTTTGAAAATTTCCTTCCCTTCTCGCCCAACAAGAGACATCTAACTTTTTCTTATCCTGCAGTGATTCGTGGTTGGCTTGTCCGAAGACGTCACCGTGAGATGCTAGTTTTGAATAAGCAATCTTATGACGGTGTGAAGACTAAACCAAAGCATAGTTGGAGGATTTCCGAAGTTATGCCAGAGGAAAAGATTGAAATTTTACCGACGGGGTTGGCAGAGCTTCAAATACGGGTCCTGAAGGCAGAATCGACGTTGGAGAAAAAGGAAGAGGAAAATGCTGCACTGCGAGATCAAGTTCGACAATATGAGGTTAGGTGGTTAGAGTATGAAGCAAAGATGAAATCTATGGAGGAGATGTGGCAAAAGGAAATGACGGCTCTCCAAATGAGTCTCGCAGCTACAAGAAAGAGCATACCTACTGATCAAACTCCTTTTCTGCCTGCAAGAACCAGCGATATGTCACTATGTCGTTGTTATGATTCCGAGGGTGCGACATCAATGGGATCACAAACTCCTGGCACAAGCACACCAATCAAATATTCTACAATTTCTGAATTTGGAACTTTGCAGGATACTAATGGTACTGTGGATGCAGTAAGCAATCTGGTCAAGGAATTTGAGCAGCGGAAGCACACCTTCGATGATGATGCAAAAGCTTTAGTAGAAGCCAAATCAGAAACTAACTTCCACCCTGATTTGGAGCTTCGGAAACTTAAAAAACAGTTTGAAATATGGAAGAATGAGTACAAAGGTAGACTAAGGGAGGCAAAAGCAAAGATTCATAAACTTGGTCATTCTGATGCTGTAAGGAGACGTTGGAAATGGTGGGGAAAGTGA 3252 41.42 MMLASLPSTIARSSLEVMLDSLRRRDDNDKDKDLPPALPVRPNSKGRLPPARRSFPIDFKVGDEGIPQCSVSELHGKEETKRKEKDFESRKGSFGSKRMKKDQNEESPYAIALENCRNDYMEESNGAAASPDNVGDSEWDDNVGYFIKKKLLVWCPLPNGKWEPGTIQSSTEEEAVVLLSKGEVMKVSTVQLVPANPAILEGVDDLIQLSYLNEPSVVHNLRQRFSQDKIYSKAGPVLIAINPFKDVGCNGNDVVMAYQQKLVDSPHIYATTDTAYNQMMSDGINQSIIISGESGAGKTETAKVAMQYLASLGGGSLGLEDGILQTNYILEAFGNAKTSRNNNSSRFGKLIEIHFSTLGKICGAKIQTFLLEKSRVAQLAQGERSYHIFYQLCAGAPSLLKGRLNLKDAWEYKYLNQSECIVIDGVDDARKFNILEEALDTIQICKEDQENAFSMLVAILWLGNISFKAIDSENRVEVVADEALLSAAKLMGCSSEELMLVLSTQNIKAGKDTIAKKLTLRQAMDTRDALAKFIYSNLFDWLGEQINKSLAVGKRCTERSISILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEDYEVDGIDWTEVNFEDNQECLNLIEKKPLGILALLDEESKFPNATDLTFANKLKHHLNGNSCFKGERGRAFGVHHYAGEVVYDTNGFLEKNRDPLPSESIQFLSSCSSKLLQLFASKVLTQEAAVSQYHMGTLESHKQSVGAKFKIGALEEKRKQILNGIVGLQKFFRGNLARRHFHDLRNAAMTLQSCNMLYHLFFKSYAIFENFLPFSPNKRHLTFSYPAVIRGWLVRRRHREMLVLNKQSYDGVKTKPKHSWRISEVMPEEKIEILPTGLAELQIRVLKAESTLEKKEEENAALRDQVRQYEVRWLEYEAKMKSMEEMWQKEMTALQMSLAATRKSIPTDQTPFLPARTSDMSLCRCYDSEGATSMGSQTPGTSTPIKYSTISEFGTLQDTNGTVDAVSNLVKEFEQRKHTFDDDAKALVEAKSETNFHPDLELRKLKKQFEIWKNEYKGRLREAKAKIHKLGHSDAVRRRWKWWGK 1083
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3715361 3725302 - Bma010713.3 Bma14g00299 94280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00299 1083 PRINTS Myosin heavy chain signature 328 355 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma14g00299 1083 PRINTS Myosin heavy chain signature 560 588 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma14g00299 1083 PRINTS Myosin heavy chain signature 285 310 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma14g00299 1083 PRINTS Myosin heavy chain signature 231 250 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma14g00299 1083 PRINTS Myosin heavy chain signature 613 641 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma14g00299 1083 ProSiteProfiles IQ motif profile. 761 788 IPR000048 GO:0005515
Bma14g00299 1083 Coils Coil 876 910 - -
Bma14g00299 1083 Gene3D - 384 443 - -
Bma14g00299 1083 CDD MYSc_Myo8 215 748 IPR036022 -
Bma14g00299 1083 Gene3D Kinesin motor domain 204 569 IPR036961 -
Bma14g00299 1083 ProSiteProfiles Myosin motor domain profile. 201 748 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma14g00299 1083 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 840 IPR027417 -
Bma14g00299 1083 MobiDBLite consensus disorder prediction 21 36 - -
Bma14g00299 1083 Pfam IQ calmodulin-binding motif 763 780 IPR000048 GO:0005515
Bma14g00299 1083 MobiDBLite consensus disorder prediction 74 104 - -
Bma14g00299 1083 Pfam Myosin head (motor domain) 203 748 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma14g00299 1083 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 148 197 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bma14g00299 1083 PANTHER MYOSIN 748 1083 - -
Bma14g00299 1083 ProSiteProfiles IQ motif profile. 816 845 IPR000048 GO:0005515
Bma14g00299 1083 Gene3D Myosin VI head, motor domain, U50 subdomain 445 739 - -
Bma14g00299 1083 SMART MYSc_2a 195 812 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma14g00299 1083 MobiDBLite consensus disorder prediction 70 104 - -
Bma14g00299 1083 PANTHER MYOSIN-2 ISOFORM X1 36 748 - -
Bma14g00299 1083 PANTHER MYOSIN-2 ISOFORM X1 748 1083 - -
Bma14g00299 1083 PANTHER MYOSIN 36 748 - -
Bma14g00299 1083 MobiDBLite consensus disorder prediction 21 54 - -
Bma14g00299 1083 Gene3D - 570 748 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00517 Bma-Chr10:5994801 Bma14g00299 Bma-Chr14:3715361 2.62E-79 dispersed
Bma14g00299 Bma-Chr14:3715361 Bma09g00494 Bma-Chr9:40977153 6.23E-145 dispersed
Bma14g00299 Bma-Chr14:3715361 Bma14g00302 Bma-Chr14:3790985 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00299 K10357 - mnt:21401706 1172.15