Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00316 CGGGAAGCGATGCTGGGACTGTTTCTGACCGCCCAAAACTTCGGCGGCGACCATGCTCAGGTCGTACCCATAACCTTGTTCGTGGCGGTTCTCTGTCTTTGTTTAATCATTGGCCATTTGCTCGAAGAAAATCGATGGGTTAACGAGTCTATCACCGCCATTCTCATTGGGTGTGCCACTGGAACTATTATCTTGTTTATTAGCAAGGGAAAGAACTCTCACATTCTAACGTTCAATGAAGAGCTCTTCTTTATGTATCTTCTTCCACCTATCATATTCAATGCAGGATTTCAAGTGAAAAAGAAGCAGTTTTTCCACAACTTCTTAACTATCATGCTGTTTGGTGTTATTGGTGTATTCATTTCGTCCCTCATTATTACGGCCGGCACTTGGCGGTTGTTCCCAAAGATAGGCTTTCATGGTCTAACAGCGAGAGATTATTTTGTTAAATTAATGACTGTTGGAAACGTACAATTTGATGTTCTTCATCAAGATGAAACTCCATTACTATATAGCCTGGTTTTTGGAGAAGGGGTTGTGAATGATGCAACCTCGGTTGTCCTCTTCAATGCCGTTCAGAAGATTGATGTTACTAGATTGAACAGCCGGACTGCTCTTCGTCTTGTCGGAGATTTTTGCTACCTTTTCTCGACGAGCACCTGTCTTGGTTTAACGGTAAATATTTTATGCTCAAAAGTTTGTTCTTTTGTTTTTTTTTGCAGACATTCGAGTACTAGGGAACTTGCCATAACGGTTTTAATGGCTTACCTCTCCTACACGTTAGCGGAGCTGCTGGAGTTAAGTGGAATCCTCACAGTTTTCTTCTGCGGGATCATGATGTCGCATTACGCGTGGCATAACATGACGGAAAGTTCAAGAATCACAACCAGGCATGTGCATGTATTTGCAATGATGTCTTTTGTTGCGGAGACATTCATTTTTCTTTACGTGGGAACGGATGCTCTTGACATGGAGAAGTGGAAGATGACCGAGTTGAGTTTTGGGAAATTATTAGGAATCTACAGCACCTTAATCTTCTTAATATTACTTGGACGTGCCGCTTTCGTATTTCCCCTCTCTGCCTTTTCGAATTACTTCAATAGGCACGCGTCGACGACATCTTCAATCTCGTTCAAACACCAGATAGTTATATGGTGGGCTGGTCTTATGAGGGGAGCTGTCTCTATAGCTCTGGCATTCAAACAGTTCACATTTTCCGGTGTTACATCTGATCCGATAAACGCCACGATGATCACCATCACGATTATCGTCGTTCTCTTCAGCACCATGGTATTTGGATTCTTGACAAAGCCGCTTATAAGCTGTCTACTGCCTCATCATGCACCAAACAGAACTGAAAGTCTACCAAAGTCTCCAGGGGAGGATATAACACTGCCGTTGTTCTCCATGGAAGAATCAACGGTCATCAATCTCACCCGAGCAAAGGATAGTTTGTCTAGGCTGATTGAGAGGCCGGTTTATACAATCCATTTCTACTGGAGAAAGTTTGATGATGCCTACATGAGGCCGATATTCGGCGGACCCCGGTCTAATCCGCCGGAATGTTAG 1569 43.47 REAMLGLFLTAQNFGGDHAQVVPITLFVAVLCLCLIIGHLLEENRWVNESITAILIGCATGTIILFISKGKNSHILTFNEELFFMYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISSLIITAGTWRLFPKIGFHGLTARDYFVKLMTVGNVQFDVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKIDVTRLNSRTALRLVGDFCYLFSTSTCLGLTVNILCSKVCSFVFFCRHSSTRELAITVLMAYLSYTLAELLELSGILTVFFCGIMMSHYAWHNMTESSRITTRHVHVFAMMSFVAETFIFLYVGTDALDMEKWKMTELSFGKLLGIYSTLIFLILLGRAAFVFPLSAFSNYFNRHASTTSSISFKHQIVIWWAGLMRGAVSIALAFKQFTFSGVTSDPINATMITITIIVVLFSTMVFGFLTKPLISCLLPHHAPNRTESLPKSPGEDITLPLFSMEESTVINLTRAKDSLSRLIERPVYTIHFYWRKFDDAYMRPIFGGPRSNPPEC 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3944965 3948704 + Bma010739.1 Bma14g00316 94297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00316 522 PANTHER SODIUM/HYDROGEN EXCHANGER 14 518 - -
Bma14g00316 522 Pfam Sodium/hydrogen exchanger family 26 440 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bma14g00316 522 PRINTS Na+/H+ exchanger signature 96 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bma14g00316 522 PRINTS Na+/H+ exchanger signature 111 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bma14g00316 522 PRINTS Na+/H+ exchanger signature 82 93 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bma14g00316 522 PANTHER SODIUM/HYDROGEN EXCHANGER 14 518 IPR018422 GO:0006812|GO:0015299|GO:0016021
Bma14g00316 522 Gene3D - 151 191 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00316 Bma-Chr5:9974003 Bma14g00316 Bma-Chr14:3944965 0 dispersed
Bma09g00716 Bma-Chr9:45234376 Bma14g00316 Bma-Chr14:3944965 1.81E-180 dispersed
Bma11g00963 Bma-Chr11:42949747 Bma14g00316 Bma-Chr14:3944965 2.53E-32 dispersed
Bma14g00316 Bma-Chr14:3944965 Bma01g00565 Bma-Chr1:5067918 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00316 - - twl:119988520 770.77