Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00324 ATGGGTAGAATCGAAGAGGATGACACTTGGGAGAAGTTATCCGACATCAAGTTGCGTTTTCCACATGTTGGCCTTGAGGACAAGGTCGTTGAAATTTGGGATGAAGTTGGTGAAAGTGATGATGAACGAGATAGGATGTTGCTTCAGATAGAGCAGGAGTGCTTGGACGTGTACCAGAGGAAAGTTGAGCAGGCTGCAAAGTCAAGAGCTCAGCTTCTTCAGGCTTTGTCGGATTCTAAACTCGAACTCTCCGGTCTTTTAGCTGCTCTTGGAGAAAAAAGTGCTGTTGGAATTCCTGAGAAGAGCTCTGGAACTATTAAGGAACAGCTTGCAGCCATAGCCCCAGCGCTTGAACTTTTCTGGAAGCAGAAAGAGGAGAGAGTGAAGGAGTTTTATGATATACAATCGCAGATTCAGAAGATATGTGGAGAAATTGCCGGGGACTTGAAGCTCATCCAGTCTCTAGCCATTGACGAGGCTGATCTATCCCTGAAAAAGTTGGATGGATATCACACCCAACTTCAAGAACTTCAGAAAGAAAAGAGTGATAGATTGCACAAGGTGCTTGAATTCGTCAGCACCGTCCATGATCTCTGTTCGGTTCTTGGATTGGATTTTATGGATACAGTAACAGAAGTTCATCCAAGCTTAAATGACTCAACTGGTGTCCAATGCAAAAGCATAAGCAATGATACTTTATCGAGGTTGGCTAGGACGGTCTTGTCGTTAAAGGAAGATAAAAAGCAGAGGTTGCGTAAGCTCCAAGAGTTTGCAACTCAGCTGATTGATCTTTGGAATTTAATGGATACTCCTGAGGAGGAAAGAAAATTGTTTAATCATGTTACTTGCAATATATCGGCTTCGGTGGATGATGTGACTGTCCCAGGAGCTCTTGCCATTGATCTTATCGAGCAGGCTGAAGTGGAGGTGGAAAGACTTGATCATCTCAAAGCCAGCAGAATGAAGGAAATTGCATTCAAGAAGCAGACCGAGCTGGAAGAGATATATCTTTGTAGTCACGTAGAAATAGATGCAGAAGCTTCTCGAGAGAAAATTATGGCGCTCATTGATTCAGGGGATGTCGAGCCTGCAGAGTTACTGGCTGATATGGATAGTCAAATTGCAAATGCCAAGGAAGAAGTCTTGAGCAGAAGAGAAATATTGGACAAGGTTGAGAAATGGACGTCAGCCTGTGAAGAAGAGAGTTGGCTAGATGACTACAATAGGGATGAAAATAGGTATAATGCAAGCAGAGGAGCTCATTTAAACCTGAAGAGGGCCGAAAAAGCTAGGATTTTGGTCAACAAAATTGGCTCACTAGTTGACTCATTGGTCGGAAAAACTCGAGCTTGGGAAGAAGAACGGGGCACGTCATTTACGTATGATGGTGTACCTCTTCTTGCCATGCTCGACGAATATGCCATGCTCAGGCATGCAAGAGAAGAAGAAAAACGAAGAATGAGGGACCAAAAAAAGTTCCACGAGCAACAAAACACGGAGCAAGAAGCCATTTTCGGTTCAAGGCCAAGCCCTGGCCGCCCGGGTGGGACAAAGAAAGTAGTGGGCCCTCGCCTAAACGGAAATTCCAACGGAACTCCCATCAGACGATTATCGCTCAATGCACATCAAAACGGATCGAGGTCGATGTCAAAAGACGGAAAGAGGCCAGTTGCTCCGGTGAACTACGTGGCCATATCAAAGGAGGATTCGCTGCCGAAGGGACCGGGCAATGACCCTGCTCCTTTTTCTCCATGA 1755 45.24 MGRIEEDDTWEKLSDIKLRFPHVGLEDKVVEIWDEVGESDDERDRMLLQIEQECLDVYQRKVEQAAKSRAQLLQALSDSKLELSGLLAALGEKSAVGIPEKSSGTIKEQLAAIAPALELFWKQKEERVKEFYDIQSQIQKICGEIAGDLKLIQSLAIDEADLSLKKLDGYHTQLQELQKEKSDRLHKVLEFVSTVHDLCSVLGLDFMDTVTEVHPSLNDSTGVQCKSISNDTLSRLARTVLSLKEDKKQRLRKLQEFATQLIDLWNLMDTPEEERKLFNHVTCNISASVDDVTVPGALAIDLIEQAEVEVERLDHLKASRMKEIAFKKQTELEEIYLCSHVEIDAEASREKIMALIDSGDVEPAELLADMDSQIANAKEEVLSRREILDKVEKWTSACEEESWLDDYNRDENRYNASRGAHLNLKRAEKARILVNKIGSLVDSLVGKTRAWEEERGTSFTYDGVPLLAMLDEYAMLRHAREEEKRRMRDQKKFHEQQNTEQEAIFGSRPSPGRPGGTKKVVGPRLNGNSNGTPIRRLSLNAHQNGSRSMSKDGKRPVAPVNYVAISKEDSLPKGPGNDPAPFSP 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4039115 4044732 - Bma030656 Bma14g00324 94305

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00324 584 Coils Coil 55 75 - -
Bma14g00324 584 MobiDBLite consensus disorder prediction 523 547 - -
Bma14g00324 584 MobiDBLite consensus disorder prediction 481 584 - -
Bma14g00324 584 Pfam Microtubule associated protein (MAP65/ASE1 family) 29 509 - -
Bma14g00324 584 MobiDBLite consensus disorder prediction 481 498 - -
Bma14g00324 584 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 1 28 577 - -
Bma14g00324 584 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 28 577 IPR007145 GO:0000226|GO:0008017
Bma14g00324 584 Coils Coil 477 497 - -
Bma14g00324 584 Gene3D - 374 507 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00324 K16732 PRC1, ASE1, MAP65; Ase1/PRC1/MAP65 family protein - qsu:112012954 892.493
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bma13g01085 Bma14g00324 CCT
Bma07g01285 Bma14g00324 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00404 Bma-Chr3:3055199 Bma14g00324 Bma-Chr14:4039115 0 dispersed
Bma08g00891 Bma-Chr8:47681322 Bma14g00324 Bma-Chr14:4039115 1.40E-172 dispersed
Bma13g01085 Bma-Chr13:43823391 Bma14g00324 Bma-Chr14:4039115 0 dispersed
Bma13g01091 Bma-Chr13:43859755 Bma14g00324 Bma-Chr14:4039115 0 dispersed
Bma01g00506 Bma-Chr1:4162911 Bma14g00324 Bma-Chr14:4039115 0 transposed
Bma10g01156 Bma-Chr10:39764488 Bma14g00324 Bma-Chr14:4039115 1.18E-162 transposed
Bma12g01150 Bma-Chr12:43977361 Bma14g00324 Bma-Chr14:4039115 1.34E-138 transposed
Bma14g02108 Bma-Chr14:44611590 Bma14g00324 Bma-Chr14:4039115 1.66E-158 transposed
Bma14g00324 Bma-Chr14:4039115 Bma07g01285 Bma-Chr7:48497526 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g575 . . Bda07g00378 Bda09g00408 Bpe09g00151 Bpe08g01113 . Bma13g01085 . Cmo06g00891 . . . . . . . . . . . . . . Cla10g00472 Cam10g0460 Cec10g0481 Cco10g0469 Clacu10g0479 Cmu10g1308 Cre10g0713 . Cone9ag0051 Cone14ag1180 Cone15ag1195 . Csa03g00474 . Cme06g02836 Blo07g00883 . . . . . Bma07g01285 Bma14g00324 Sed08g2977 . . . . . . . . Bhi11g00574 Tan01g1748 Cmetu06g2464 . . . . . . . . . . . Lsi05g00562 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003979 3 1 2 4 2 1 2 1 1 1 1 1 1 1 1 2 1 3 1 1 1 1 1 1 1 1 1 3 2 1 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g00324 Bma_Chr14 FPKM 6.274632 6.362992 0.855949 0.641625 19.686028 19.904982 20.786613 0.0 0.0 0.0