Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00331 ATGGAGTGGAAAAGAGGCTCCTCGATCGGCCGGGGTTCGTCGGCCACTGTGTACTTAGCGACGGCCTTGCCCTCCGGCGAGGCGTTTGCGGTTAAGTCCGGCGAGCTTTCTTCTTCTTCCTCGCTGCGGAAAGAGCAGATATTTTTGTCCGGATTGAGCTCTCCTTACATTGTCAAATACTTGGGTTTTGATGTTAGTGATGAAGACAGAGTGCCCATGTTCAATCTTTTCATGGAGTACGAACCGGGCGGCTCTCTCTCCGACGCGATTCGCCGGCATGGTGGTCGATTGGACGAGGGACGGATCAGATTCTACACTAGGCAGATTTTGCGTGGTCTGGATTATCTTCACGATAATGGGTTTGCGCATTGCGATATAAAGAGTGAAAATATATTGGTGGGTGAAGAAGGTGTGAAAATTGCTGATTTGGGTTGTGCTAAATTGGTGGAGAAAGTCACCGGAAAAGCTTCTTTTGGCGGTACACCGGCTTTCATGGCACCGGAAGTCGCGCGCGGTGAAGAACAAGGGTTTGAAGGCGACGTGTGGGCCCTTGGCTGTACTTTGATCGAGATGGCAACAGGTAAACATCCATGGCTGGACAGATGTGGTGATCCGGTATCAATTCTTCACCGAATCGGGTTTTCCAGCGAATTGCCATTCTTCCCGAGCTGGTTTTCCGATGAGGGTAAGGATTTTTTGAGCAAGTGTTTGAAGAGAGATTCAAAAGAGAGGTGGACGGCTAAGAAACTGCTCGAACATCCATTTCTTGATGAACAGAGCTCAGATTCAATTACCGGAAAGCAAAGTCCAGCAAATTTCACAAATTCTCCGAATGGTGTTTTGGAGAAAGGTATTTTCGATTCAGTCGAAGTATTAGCAAGTCCTCTAAATCTAACCCAGCAAAGCTCCTCGACGAGTTCTCCGGCTGAAAGGATAAACAATTTGGTCGGAAACTCGTTGCCCGGGGAAAGATTTCCGGCCAGTTGGACGATGGACGAAGATTGGATCTCAGTCAGAAGCAACATCAACAACGAAACAGTCGATTTATCTGACGAAAACGACTTGGCCATGATCTATGAAACCGGAAGTACGAGTATGACTGAAACTTCTTCAGATATTCAAGAAGAAGATAGTGAAATTGAAGAACTTGATCAAAACTTAAGAACCACGCAGATTGAATTTCCAGACGTAGAATTCAAATTTGTCTCAGTGAATGTAAAACTTGAATCAGATAATGAGAATTCTTTTGCTACCCATTCTCTTTTTCCATCATTAACTTTCTTAACTTCTATCTTCTGTCATTAA 1305 45.36 MEWKRGSSIGRGSSATVYLATALPSGEAFAVKSGELSSSSSLRKEQIFLSGLSSPYIVKYLGFDVSDEDRVPMFNLFMEYEPGGSLSDAIRRHGGRLDEGRIRFYTRQILRGLDYLHDNGFAHCDIKSENILVGEEGVKIADLGCAKLVEKVTGKASFGGTPAFMAPEVARGEEQGFEGDVWALGCTLIEMATGKHPWLDRCGDPVSILHRIGFSSELPFFPSWFSDEGKDFLSKCLKRDSKERWTAKKLLEHPFLDEQSSDSITGKQSPANFTNSPNGVLEKGIFDSVEVLASPLNLTQQSSSTSSPAERINNLVGNSLPGERFPASWTMDEDWISVRSNINNETVDLSDENDLAMIYETGSTSMTETSSDIQEEDSEIEELDQNLRTTQIEFPDVEFKFVSVNVKLESDNENSFATHSLFPSLTFLTSIFCH 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4125550 4126854 + Bma010752.1 Bma14g00331 94312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00331 434 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 363 - -
Bma14g00331 434 SMART serkin_6 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g00331 434 SUPERFAMILY Protein kinase-like (PK-like) 3 314 IPR011009 -
Bma14g00331 434 CDD STKc_MAPKKK 2 256 - -
Bma14g00331 434 Coils Coil 366 393 - -
Bma14g00331 434 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g00331 434 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Bma14g00331 434 ProSiteProfiles Protein kinase domain profile. 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g00331 434 Gene3D Transferase(Phosphotransferase) domain 1 2 304 - -
Bma14g00331 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Bma14g00331 434 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 15 1 363 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00642 Bma-Chr8:40560372 Bma14g00331 Bma-Chr14:4125550 2.83E-93 dispersed
Bma13g00651 Bma-Chr13:16074561 Bma14g00331 Bma-Chr14:4125550 3.34E-46 dispersed
Bma14g00331 Bma-Chr14:4125550 Bma15g00785 Bma-Chr15:16763102 1.63E-52 dispersed
Bma14g00331 Bma-Chr14:4125550 Bma12g00815 Bma-Chr12:37793360 1.04E-107 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66875 PF00069 Pkinase 8.50E-57 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00331 K20716 - jre:108983203 411.379