Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00333 ATGACTTCAGCTCAAGATCCATTCTACGTTGTTAAGGATGAAATCCAAGAATCTATTGACAAGTTGCAATCAACTTTTCATCGATGGGAGCGTATTTCTGATACAGGAGATAGAGTGCATCTCACAAATGAGCTGCTTGCTAGTTGTGAAAGCATCGAGTGGCAGGTGGATGAATTAGACAAGGCTATAGCTGTTGCAGCCAGAGATCTGGCTTGGTATGGCATTGAAGAAGTAGAGCTTGAAAAACGAAAGAGATGGACTAGCACAGCTCGTGCTCAGGTTGGCTCTGTGAAAAAGGTTGTGAAAGCTGGAAAGGAGCGCGATGGCATTACCACTACCACAATGAATATGAATGGGATGCGTCGAGAACTGTTAAGGTTGCCTAATACTAATGAAAGAGATAGGTCAAATCAATACAACGACGAATATAATGATGATTTTATAGCTTCGGAATCAGATCGACAGTTGCTTCTCATTAGGCAACAAGACGAGGAATTAGATGAGCTCAGTGCTAGCGTGGAGAGAATCGGAGGAGTTGGACTTACAATACATGACGAACTCCTTGCGCAGGAGAAAATCATCGATGACCTAGGAACAGAAATGGACGGTACATCAAATCGCCTTGATTTTGTTCAGAAAAAGGTTGCTGTGGTCATGAAGAAGGCCGGTATTAAGGGGCAGATGATGATGATTTTGTTCTTAATTGTTTTGTTCATCATCCTCTTTGTGTTGGTCTTCTTAACTTAG 747 42.17 MTSAQDPFYVVKDEIQESIDKLQSTFHRWERISDTGDRVHLTNELLASCESIEWQVDELDKAIAVAARDLAWYGIEEVELEKRKRWTSTARAQVGSVKKVVKAGKERDGITTTTMNMNGMRRELLRLPNTNERDRSNQYNDEYNDDFIASESDRQLLLIRQQDEELDELSASVERIGGVGLTIHDELLAQEKIIDDLGTEMDGTSNRLDFVQKKVAVVMKKAGIKGQMMMILFLIVLFIILFVLVFLT 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4169954 4173221 + Bma010755.1 Bma14g00333 94314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00333 248 SUPERFAMILY SNARE fusion complex 155 218 - -
Bma14g00333 248 Gene3D - 163 225 - -
Bma14g00333 248 SUPERFAMILY t-snare proteins 5 99 IPR010989 GO:0016020|GO:0016192
Bma14g00333 248 Pfam SNARE domain 193 244 IPR000727 -
Bma14g00333 248 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 156 218 IPR000727 -
Bma14g00333 248 PANTHER SYNTAXIN-61 1 247 - -
Bma14g00333 248 SMART tSNARE_6 151 218 IPR000727 -
Bma14g00333 248 Pfam Syntaxin 6, N-terminal 6 98 IPR015260 GO:0016020|GO:0048193
Bma14g00333 248 CDD SNARE_Qc 159 216 - -
Bma14g00333 248 Gene3D - 2 104 - -
Bma14g00333 248 PANTHER SYNTAXIN 1 247 IPR045242 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01329 Bma-Chr7:48806264 Bma14g00333 Bma-Chr14:4169954 6.45E-149 dispersed
Bma14g00333 Bma-Chr14:4169954 Bma07g01292 Bma-Chr7:48531868 1.25E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00333 K08500 - zju:107433077 341.658