Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00341 ATGGAAGCGACGCTGAAGCTAATCTTCACCGTCACTTTCTTCGTCTCCGCGACTGCTTCTGCTGGATACGTTCGACCTCAACCTCGAAAGAATCTGCAATTTCCATGGGATTCCAAGTCTTCTTCGCAGCCCCAGCAGGTCCATATTTCTTTGGCAGGAGAAAAGCACATGCGAGTGACGTGGGTAACTGATGATAAATCTTCGCCTTCGTTTGTTGAATATGGAACATCTACCGGCACTTATAATTCTGTGGCACAAGGAGAAAGCACCTCTTATAGCTATCTATTATACAATTCGGGGAAAATACACCATGTCGTAATCGGTCCCTTAGAGCCCGACAAAGTTTACTTTTACCGATGTGGAGGACAGGGCCGTGAATTCCAGCTGAAGACACCTCCAGCTCAATTGCCGATTACTTTTGCTGTGGTGGGAGATTTGGGGCAAACTGGATGGACAAAGTCAACACTGGACCACATCGACCAGTGCAAATATGATGTACATTTGCTTCCGGGCGATCTATCCTATGCTGATTATATGCAAAGACGATGGGACACGTTTGGTGAACTTGTCGAGCCACTTGCTAGTGCAAGGCCATGGATGGTTACGGAAGGAAATCATGAAAAGGAAGGCATACCCTTGTTGAAAGATGGGTTTGAACCTTACAACGCCAGATGGAAGATGCCGTTTCAGGAGAGTGAATCAAGTTCAAATCTTTACTATTCTTTTGAAGTTGCAGGTGCTCATATTATTATGCTTGGATCATATACGGATTATGATGAATACTCAGATCAATATAACTGGCTTAAGGCTGATCTAGCAAAGGTGGACAGAAAAAAAACTCCTTGGCTACTTGTCCTATTTCATGCCCCATGGTATAACAGTAACAAGGCACACCAAGGCGAAGGTGATCGGATGATGGAATCCTTTGAGCCCTTGCTTTATGCGGCCGGTGTTGATATAGTGCTTGCTGGTCATGTGCATGCCTACGAACGATCGAAACGGGTCTATGGCAGAAGATCTGATCCATGTGGGGTCGTGCACATAACAATTGGTGACGGTGGAAACCGAGAAGGCTTAGCACACAGATACATTTATCCACAGCCTGAATGGTCTGTGTTCCGAGAAGCAAGATTTGGCCACGGTGAACTTAAACTTGCGAATTCAACTCATGCCTTGTGGAGCTGGCATCGGAACGACGACGACGAGCCAGTAAGATCCGACCATGTGTGGATTACCTCATTAGCCTCTTCGGCCTGCATTGCTGAGAAGAAAATTGAACTGAGGAAGATACTTATGGCTCCATAA 1305 45.98 MEATLKLIFTVTFFVSATASAGYVRPQPRKNLQFPWDSKSSSQPQQVHISLAGEKHMRVTWVTDDKSSPSFVEYGTSTGTYNSVAQGESTSYSYLLYNSGKIHHVVIGPLEPDKVYFYRCGGQGREFQLKTPPAQLPITFAVVGDLGQTGWTKSTLDHIDQCKYDVHLLPGDLSYADYMQRRWDTFGELVEPLASARPWMVTEGNHEKEGIPLLKDGFEPYNARWKMPFQESESSSNLYYSFEVAGAHIIMLGSYTDYDEYSDQYNWLKADLAKVDRKKTPWLLVLFHAPWYNSNKAHQGEGDRMMESFEPLLYAAGVDIVLAGHVHAYERSKRVYGRRSDPCGVVHITIGDGGNREGLAHRYIYPQPEWSVFREARFGHGELKLANSTHALWSWHRNDDDEPVRSDHVWITSLASSACIAEKKIELRKILMAP 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4234962 4237810 + Bma010762.1 Bma14g00341 94322

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00341 434 PANTHER PURPLE ACID PHOSPHATASE 18 7 425 - -
Bma14g00341 434 PANTHER ACID PHOSPHATASE RELATED 7 425 IPR039331 GO:0003993
Bma14g00341 434 Gene3D - 43 134 - -
Bma14g00341 434 Gene3D - 135 420 IPR029052 -
Bma14g00341 434 SUPERFAMILY Metallo-dependent phosphatases 137 404 IPR029052 -
Bma14g00341 434 Pfam Iron/zinc purple acid phosphatase-like protein C 344 401 IPR025733 -
Bma14g00341 434 CDD MPP_PAPs 137 413 IPR041792 -
Bma14g00341 434 Pfam Calcineurin-like phosphoesterase 139 329 IPR004843 GO:0016787
Bma14g00341 434 Pfam Purple acid Phosphatase, N-terminal domain 44 125 IPR015914 GO:0003993|GO:0046872
Bma14g00341 434 SUPERFAMILY Purple acid phosphatase, N-terminal domain 35 133 IPR008963 GO:0003993|GO:0046872
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00341 K22390 ACP7; acid phosphatase type 7 - rcu:8282915 747.273
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00122 Bma-Chr1:1215028 Bma14g00341 Bma-Chr14:4234962 4.79E-27 dispersed
Bma01g01950 Bma-Chr1:72031569 Bma14g00341 Bma-Chr14:4234962 0 dispersed
Bma08g01194 Bma-Chr8:50842975 Bma14g00341 Bma-Chr14:4234962 6.87E-38 dispersed
Bma09g00550 Bma-Chr9:42459523 Bma14g00341 Bma-Chr14:4234962 1.30E-85 dispersed
Bma14g00341 Bma-Chr14:4234962 Bma15g00974 Bma-Chr15:37826280 1.00E-44 dispersed
Bma14g00341 Bma-Chr14:4234962 Bma11g00846 Bma-Chr11:28353568 4.31E-106 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g498 Blo03g00564 . . . . . . . . . Cma01g01134 Cma09g00948 . Car09g00861 . Cpe06g00763 Cpe02g00767 . . . . . . . . . . . . . . . . . . Lsi04g01205 . . . . . . . Bpe11g00545 . . Bma14g00341 . Cmo01g01185 Cmo09g00946 . . . Car16g00545 . . . . . . . . . Cla05g01492 Cam05g1608 . Cco05g1637 Clacu05g1588 Cmu05g1491 . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008020 0 1 1 1 1 1 2 1 1 1 1 1 2 1 2 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g00341 Bma_Chr14 FPKM 89.313881 97.141129 87.311729 84.018135 75.094742 72.748528 75.465591 102.06636 112.577118 109.16095