Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00342 ATGGCGAACGCTCCAGCCAATCCGAAGAGGCCGACTTGCCCATCTTGCTCCAAGCCCGCCCGTCTCTGTCTATGCTCTCGGATCCAGAATCCTTCTATTGACAATTCGATCGGCGTCATTATTCTTCAACATAGTTTAGAGAGAAAGCATCCTCTAAACTCTGCTAGAATAGCAAAATTAGGGCTCAAAAATTTTAAGATTGTGAATGTTTCTGACGTCAACTTTGAAGCGTGCTTCAGGATCCAAGCGAACGAGCCGAATCCAGAAACCTCTTATCTCGTTGATGAAACAAGAGAATTCGGATTGCGAAATGACGATAAGTGCACGCGAAAAGCTCAAAATCAAGCAGCAGGGTTTATCGAGAATAGAATTAGCCAGCGCGAGACCTCTAATGGCGATTTGAATCCATTGGAAGCTGCGATTACAGCCACCATTGTCAAATATGGAGTCATAAGCTCAATCGATCACATTTGGCTGCAGAAAAACCAAGAGCAGCAGCGTAATTTTGATGAGCTTTTAAGCTGTCCAGCTGCCCGTAATGCTCTAGCAAGAGGTTTCGCTGTTCAGAAGCTGCAGAAAAGAGAATTCAACGACGGCGGGGAGATGGAGAAGAAGAGAGAATTTGAATCCGAATTCGAGGTTGAGGTTCCTCCAAACACAGCACTACTATTTCCCACTGAAAATGCGTTCAACGTTGATAACCTGAAAATTGCTGATCTTAAAGTAGAGAATTTGATTGTACTGGATGGGACTTGGGCAAAGGCAAAGAGAATGTACAAAGAGAATCCATGGCTGAAGCTTCTACCTCATTTAAAGTTGGATTTGGAGAAGATGAGCTTGTACGAGGAAGTGAGGCATCCGCCGAAGGTTGGATTTTTGTCAACCATTGAAAGCATTGTGTATGCATTGAAAGCCATGGGAGAGAATCCTCAAGGTCTGGATAATCTCTTGGATGTTTTTGAGTCCATGGTTGGAGATCAGAGGAGATGTAAAGATGATAGGTGGAAGAAGAATGCTACCAAGGACTCACCCTTTTCTTCACACTGTCTTTAA 1053 43.87 MANAPANPKRPTCPSCSKPARLCLCSRIQNPSIDNSIGVIILQHSLERKHPLNSARIAKLGLKNFKIVNVSDVNFEACFRIQANEPNPETSYLVDETREFGLRNDDKCTRKAQNQAAGFIENRISQRETSNGDLNPLEAAITATIVKYGVISSIDHIWLQKNQEQQRNFDELLSCPAARNALARGFAVQKLQKREFNDGGEMEKKREFESEFEVEVPPNTALLFPTENAFNVDNLKIADLKVENLIVLDGTWAKAKRMYKENPWLKLLPHLKLDLEKMSLYEEVRHPPKVGFLSTIESIVYALKAMGENPQGLDNLLDVFESMVGDQRRCKDDRWKKNATKDSPFSSHCL 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4238564 4239760 - Bma010763.1 Bma14g00342 94323

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00342 350 Pfam DTW domain 10 328 IPR005636 -
Bma14g00342 350 PANTHER DTW DOMAIN-CONTAINING PROTEIN 2 4 338 - -
Bma14g00342 350 SMART DTW_2a 9 332 IPR005636 -
Bma14g00342 350 PANTHER UNCHARACTERIZED 4 338 IPR039262 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00342 - - - csv:101217537 361.303
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g496 Blo03g00565 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bpe11g00544 . . Bma14g00342 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011473 0 1 1 1 1 0 1 1 2 1 1 0 1 1 1 1 1 2 1 2 1 1 1 1 1 1 1 2 1 1 31
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g00342 Bma_Chr14 FPKM 7.023392 5.956192 0.146285 0.340118 2.587379 2.384694 4.677563 0.0 0.117966 0.0