Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00358 ATGGTTGGGACGGAAGCTAATGGAAGAACACGGATGGCATTTTCAGTCGTCAATGGCGGACAAAACGGGTGTATGGACAGCGCTCCAACAAGCCTTGCCGGCTCTGATTACGGTGGCGTAGAGTTCTCCAGAGAAGACGTTGAAGCTTTGTTGAATGAGAAATTGAAAAGAAAAGACAGATTCAATCTCAAGGAAAAATGTGACAACATGGCGGAATACATTAAAAGGCTTAAATTATGCGTCAAATGGTTTCAAGATCTTGAATCTGCCTATATATTAGAGCAAGAGAGGCTGCATGATCGATTGGAATCAGCCGAGCTGAAATGCTCCGAAATGGAGATATTATTGGAGAATAAGGAAGAAGAGTTGAATTTAATCATTGTCGAGCTTAGAAACAGCTTCGAGTGTTTGCAAGAGAAGTTTACGATAGAAGAATCAGATAAGTTGGTTGCAATGGACTCTCTAGCGAAAGAGAAAGAGGCTAGACAGCATATTGAGAGGTCACAGGCCTCCATCGTGGAAGAACTTGGTAGGGCCCAAAGAGATCTTTCAAGTGCAAATCAAAAGATTACATCGCTAAATGATATGTACAAGCGGTTGCAAGAGTACATCACGAGTTTACAACATTATAATGGAAAACTTCATACGGAGCTGTCGACAGTCGAAGACGACCTGAAACGAATAGAGAAAGAGAAGGCTTCAATGGTGGAAAATCTCAGCTTGTTAAAGGGTCAACTTACTTTGTCCAAAGCTTCTCATGATGACGCGGTGAAGCAAAAAGAAGCGATGGTGGATGAAGTTTCGTGTCTAAGGCGAGAATTACAGCAAGTGAGGGATGATCGGGATCGTCAACTTTCACAGGTTCAGTCGTTGACAGTTGAAGTCATCAAGTACAAAGAGAGTGCAGAAATGTGCAATTGTGAGCTGGAAATTTTGAAAACTAAGACAAGTGAATTAGAGGCAACATGTTCTTGGCAAAACGACGAACTAAAGGCCTTGAATAATCATCTATCTGTTGCAGAAAGCAAACTCCAGGTGTCTGATTTATCTGCAATGGCGACGAAGTCAGAGTTTGAAGAGCAAAAGAGACTTATAATCGAGTTACAAAATCGTTTGGATGATGCAGAAACAGAGCTTACGGAAGGAGAGAAGTTGCGAAAGAAGTTGCATAATACCATCTTGGAACTGAAAGGGAACATTCGGGTGTTCTGTAGAGTGCGCCCTTTAATACCCGAAGATGGTTTTAGCTCAGAAGGAAAAGTTTTCTCCTATCCCTCGTCAGTTGAAGCCCTTGGACGAGGAATTGACGTAATGCAAAATGGGCAGAGACATTCTTTTACGTTCGATAAAGTATTTATGCCCACGTCAACCCAAGAGGACGTGTTTGTGGAAATTTCGCAACTCGTACAAAGTGCACTAGATGGTTACAAGGTTTGCATTTTTGCTTATGGACAAACCGGATCGGGCAAGACCTACACGATGATGGGTGGGCCTGGCCTCAGAGGGTTGATACCTCGATCGTTAGAACAAATATTTCAAACGAGACAATCTCTTCAACCTCAAGGTTGGAAATATGAAATGCAGGTGTCGATGCTGGAAATCTATAATGAAAATATTCGTGATTTGCTCGGGATTCATCGATCGTATTCAGATTCTTCACGACTTGAGAATTGTAGTCCCGGAAAGCAATATGCGATCAAACACGACGTAAGTGGAAACACGCATGTCTCTGAACTTACGGTCGTGGATGTTCGTAGCGTGAAAGAAGTCTCGTTTCTTTTAGATCAAGCTGCTCGTAGCAGATCTGTTGGGAAAACCCAAATGAATGAGGAATCTTCAAGAAGTCATTTTGTGTTCACTCTTCGAATATTCGGTGTAAATGAGAGCACGGATCAACAAGTGCAAGGCATTTTGAATCTGATCGATCTTGCCGGGAGCGAACGGCTTTCCAAGAGCGGATCGACCGGCGACCGATTGAAAGAAACACAAGCTATTAACAAAAGTCTGTCATCTTTAAGTGATGTTATATTTGCTTTGGCAAAGAAGGAAGAGCATGTACCATTTAGAAACTCAAAACTTACATATCTTCTTCAGCCTTGTCTCGGCGGCGATTCGAAGACGTTGATGTTTGTAAATATATCTCCCGACCCTTCTTCGCTCGGCGAATCTCTCTGCTCCCTCCGCTTCGCCGCTCGTGTTAATGCTTGCGAAATAGGAACTCCTCGCCGTCAAACAAATTCACGCTGA 2247 42.9 MVGTEANGRTRMAFSVVNGGQNGCMDSAPTSLAGSDYGGVEFSREDVEALLNEKLKRKDRFNLKEKCDNMAEYIKRLKLCVKWFQDLESAYILEQERLHDRLESAELKCSEMEILLENKEEELNLIIVELRNSFECLQEKFTIEESDKLVAMDSLAKEKEARQHIERSQASIVEELGRAQRDLSSANQKITSLNDMYKRLQEYITSLQHYNGKLHTELSTVEDDLKRIEKEKASMVENLSLLKGQLTLSKASHDDAVKQKEAMVDEVSCLRRELQQVRDDRDRQLSQVQSLTVEVIKYKESAEMCNCELEILKTKTSELEATCSWQNDELKALNNHLSVAESKLQVSDLSAMATKSEFEEQKRLIIELQNRLDDAETELTEGEKLRKKLHNTILELKGNIRVFCRVRPLIPEDGFSSEGKVFSYPSSVEALGRGIDVMQNGQRHSFTFDKVFMPTSTQEDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGGPGLRGLIPRSLEQIFQTRQSLQPQGWKYEMQVSMLEIYNENIRDLLGIHRSYSDSSRLENCSPGKQYAIKHDVSGNTHVSELTVVDVRSVKEVSFLLDQAARSRSVGKTQMNEESSRSHFVFTLRIFGVNESTDQQVQGILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSLGESLCSLRFAARVNACEIGTPRRQTNSR 748
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4359583 4363616 - Bma010779.1 Bma14g00358 94339

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00358 748 PANTHER KINESIN-LIKE PROTEIN KLP-3 4 747 - -
Bma14g00358 748 PRINTS Kinesin heavy chain signature 475 496 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma14g00358 748 PRINTS Kinesin heavy chain signature 606 623 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma14g00358 748 PRINTS Kinesin heavy chain signature 686 707 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma14g00358 748 PRINTS Kinesin heavy chain signature 637 655 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma14g00358 748 Coils Coil 102 122 - -
Bma14g00358 748 PANTHER KINESIN-LIKE PROTEIN 4 747 - -
Bma14g00358 748 SMART kinesin_4 397 744 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma14g00358 748 Gene3D Kinesin motor domain 342 738 IPR036961 -
Bma14g00358 748 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 356 734 IPR027417 -
Bma14g00358 748 Pfam Kinesin motor domain 405 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma14g00358 748 Coils Coil 351 392 - -
Bma14g00358 748 Coils Coil 176 203 - -
Bma14g00358 748 Coils Coil 211 245 - -
Bma14g00358 748 Coils Coil 260 287 - -
Bma14g00358 748 ProSiteProfiles Kinesin motor domain profile. 399 736 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma14g00358 748 CDD KISc_C_terminal 397 738 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00358 K10405 KIFC1; kinesin family member C1 - csv:101215636 1131.7
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00328 Bma-Chr7:4274710 Bma14g00358 Bma-Chr14:4359583 0 dispersed
Bma14g00358 Bma-Chr14:4359583 Bma13g00612 Bma-Chr13:14475688 2.85E-87 dispersed
Bma14g00358 Bma-Chr14:4359583 Bma05g00820 Bma-Chr5:45530211 5.11E-89 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g417 Blo03g00584 . Bda07g00337 . . . . . . . Cma01g01154 Cma09g00922 . Car09g00838 . Cpe06g00742 Cpe02g00747 Bhi09g01950 . . . . . . . . . . . . . Cone6ag0089 Cone9ag0105 . . Lsi04g01248 . . . . . . . Bpe11g00523 . . Bma14g00358 . Cmo01g01207 Cmo09g00919 . . . Car16g00566 . . . . . . . . . Cla05g01542 Cam05g1650 Cec05g1655 Cco05g1694 Clacu05g1643 Cmu05g1538 Cre05g1648 . . . Cme04g00801
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006975 1 2 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 0 1 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g00358 Bma_Chr14 FPKM 4.479209 4.999531 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0