Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00364 ATGGACTCCCACCAGCTCTTTGGGTTCTCATCATCTTCTCCAAACGTCCCAAGCAGAGTGCTCAGCTCTTTGAATTACAACGTTGGAAACTTTCCCAATTCTTCCTTTTTATCTCGCATCGATTCAGATTCTATTACAAACTTGAGTGATAGTCAAGAGCAAAGCTCAACTGAGAATCTTTCTGGAGTCAGCCCTTCGTGTAACTCTTTGATTGACACAAACAGCTGTTTCCTCCCCATCAGTGATTCACCAGATTACTGCCAAGAGAGTCCACTGCTTTATCTGCGTGCGGCTGAGTTTTCACGGGATGTGAGCTCGATCCGAAACATGAGCCACGATTTACAAGAATTAGAGACTGCTCTTATGGGACCCGACGAAGAGACAGACGAAATCAGCAAACCAAATTCTTCTTTTGGGGAAAGTAGTAGATCTCAAAAACTGGGGCAGGGATCGATGTTATGGAGCGAAGATTGCCATGATTCACCCGCTATCCTTTCTCAGCCTTCGTTCGTCTCTCGACGTAGGCAGACAGACGAAGTGGTCTGTACTGAGAAACGACAGAAGTCAATGGAGGAAGACTCTTTGCAGGGATTTCCATCTGGCAATTTGAAGCAATTACTGATTGCTTGTGCCAAAGCTCTAGCAGAGAATAACTTGGCCAATTTTGATAAGTTGGTTGAGAAGGCAAGAAGTGCTGTCTCGATAAGTGGAAAACCAATACAAAGACTCGGAGCTTATATGGTAGAAGGACTTGTCGCAAGGAAGGAGGAATCGGGTGCTAATATCTACCATGCCCTTAAGTGCAGGGAGCCAGAAAGTAGTGATTTATTATCGTACATGCAGATTCTTTATGAAATTTGCCCTTATTTGAAATTTGGTTACATGGCTGCCAATGGAGCCATTGCAGAAGCTTGCAAGAATGAAGATTGCATCCATATAATAGACTTTCAGATTGCTCAAGGGACCCAGTGGATGACTCTCCTTCAAGCACTTGCGGCCAGACCTGGTGGGCCACCCTGCGTGAGGATTACTGGTATCGATGACCCTGTTTCTAAATATGCTCGAGGGGGCGGATTAGAGGCGGTGGGAAGGAGATTGGCTAACATATCGGAAAATTTCCAGATTCAAGTAGAGTTTCAAGGAGTACCCGTTTTTGCTCCAAATGTCACCCTTGACATGCTCGATGTAAGGCCAGGGGAGGCTCTAGCCGTGAATTTCCCTATGCAACTCCATCACACCCCAGACGAGAGCGTTGATGTGCGTAATCCTCGAGACGAGCTTTTAAGAACCATCAAATCGCTCTCTCCCAAAGTTGTCACATTGGTCGAGCAAGAATCGAACACAAACACGACGCCTTTCTTTTACAGGTTTGTCGAAGCGCTCGAGTATTATTTGGCCATTTTCGAGTCGATCGATGTTACTCTTCCAAGAAATAGCAAGCAGCGTATAAACGTGGAGCAACATTGTTTAGCACGAGATATCGTTAATGTCATCGCTTGTGAGGGGACTGAAAGGGTAGAGCGGCACGAGCTCTTTGGGAAATGGAAGTCGAGGTTGACGATGGCCGGATTTAAGCAGTTTCCATTGAGCTCTTATGTGAATTCTGTCATAAGGAGCTTACTAAAGCTCTATTCCGAGCATTACACGCTGGTCGAAAAAGACGATGCCATGCTGTTGGGTTGGAAGGAAAGGAACCTTATATCTGCATCGGCTTGGTACTGA 1722 45.76 MDSHQLFGFSSSSPNVPSRVLSSLNYNVGNFPNSSFLSRIDSDSITNLSDSQEQSSTENLSGVSPSCNSLIDTNSCFLPISDSPDYCQESPLLYLRAAEFSRDVSSIRNMSHDLQELETALMGPDEETDEISKPNSSFGESSRSQKLGQGSMLWSEDCHDSPAILSQPSFVSRRRQTDEVVCTEKRQKSMEEDSLQGFPSGNLKQLLIACAKALAENNLANFDKLVEKARSAVSISGKPIQRLGAYMVEGLVARKEESGANIYHALKCREPESSDLLSYMQILYEICPYLKFGYMAANGAIAEACKNEDCIHIIDFQIAQGTQWMTLLQALAARPGGPPCVRITGIDDPVSKYARGGGLEAVGRRLANISENFQIQVEFQGVPVFAPNVTLDMLDVRPGEALAVNFPMQLHHTPDESVDVRNPRDELLRTIKSLSPKVVTLVEQESNTNTTPFFYRFVEALEYYLAIFESIDVTLPRNSKQRINVEQHCLARDIVNVIACEGTERVERHELFGKWKSRLTMAGFKQFPLSSYVNSVIRSLLKLYSEHYTLVEKDDAMLLGWKERNLISASAWY 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4406307 4408028 + Bma010784.1 Bma14g00364 94345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00364 573 Coils Coil 212 232 - -
Bma14g00364 573 MobiDBLite consensus disorder prediction 134 151 - -
Bma14g00364 573 MobiDBLite consensus disorder prediction 122 153 - -
Bma14g00364 573 PANTHER CHITIN-INDUCIBLE GIBBERELLIN-RESPONSIVE PROTEIN 1 11 572 - -
Bma14g00364 573 Pfam GRAS domain family 203 572 IPR005202 -
Bma14g00364 573 ProSiteProfiles GRAS family profile. 194 573 IPR005202 -
Bma14g00364 573 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 11 572 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02109 Bma-Chr1:77250880 Bma14g00364 Bma-Chr14:4406307 2.50E-142 dispersed
Bma13g01108 Bma-Chr13:44033288 Bma14g00364 Bma-Chr14:4406307 4.05E-170 dispersed
Bma14g00364 Bma-Chr14:4406307 Bma14g01407 Bma-Chr14:26610798 4.53E-76 dispersed
Bma14g00512 Bma-Chr14:5700409 Bma14g00364 Bma-Chr14:4406307 6.89E-63 dispersed
Bma14g00364 Bma-Chr14:4406307 Bma02g01308 Bma-Chr2:55213484 2.01E-170 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58308 PF03514 GRAS 3.90E-131 CL0063 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00364 - - pmum:103342480 808.135