Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00368 CTGGTCATGAAACGAGGATACCAAGCTTCTCCATCGACTTCTCTTGGGCCTCCAAAATCCAGAGTTAAGTACAACCCAGAAGGTGATGCTCAGTTCTTAGAAGATGAAAGCACGAAGTTATTTGCCAGGAAAGTGGCTGACCATTACAGTGCTAGGACTAATCAGACTCTAGAAGAAAGGGAAAATAGTCCAATTATCCACTTAAAGAAACTTAACAACTGGATTAAGAGTGTTTTGATTCAACTCTACGCTCGCCAAGGTGATGCTGTTCTAGATCTTGCTTGTGGAAAGGGTGGTGATCTTATCAAATGGGATAAGGCAAAAATTGGATATTATGTTGGAGTTGATATTGCTGAAGGCTCTATAGAGGACTGTCGAACGCGCTACAATGGTGATGCAGACCATCACCAGCGTCGTAAAAAGTTTACCTTTCCTGCCCGCCTTGTTTGTGGAGATTACAATGAAATGACCGCTGCCTGTTGTTTAAGTAATAGTTTTGAACTTTGTACTATTTTGCAGTTTGCCATGCATTATTCTTGGACCTTCAAAGCTTCCAGCCCCTTTGGCATAAAGTATCAGTTTCACCTTGAGGATGCTGTTGATTGTCCTGAATGGATTGTCCCTTTCAATATCTTCAAAGCCTTGGCAGAAGAATACGATCTAGAGCTCGTCTTTGTGAAGAACTCGCATAATTTTGTGCACGAGTACTTGAAGAGGCCGGAATATGTTGAACTCATGAGGAGGCTCGGTGCCTTGGGCGATGGAAATCAAGATCAGAGCACATTATCAGCAGATGAATGGGAAGTGGCTTATTTGTACCTTGCATTTGTTTTGAAAAAGCGAGGTGTGCCGGACCGGACACAAAGAAATGGTAGGAGAGAGAGAGGGCAGATGCAGATAACGAAGGAGGATATTATGTTCATTGGTAGTGATTGA 936 42.84 LVMKRGYQASPSTSLGPPKSRVKYNPEGDAQFLEDESTKLFARKVADHYSARTNQTLEERENSPIIHLKKLNNWIKSVLIQLYARQGDAVLDLACGKGGDLIKWDKAKIGYYVGVDIAEGSIEDCRTRYNGDADHHQRRKKFTFPARLVCGDYNEMTAACCLSNSFELCTILQFAMHYSWTFKASSPFGIKYQFHLEDAVDCPEWIVPFNIFKALAEEYDLELVFVKNSHNFVHEYLKRPEYVELMRRLGALGDGNQDQSTLSADEWEVAYLYLAFVLKKRGVPDRTQRNGRRERGQMQITKEDIMFIGSD 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4433117 4436053 + Bma010789.1 Bma14g00368 94349

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00368 311 Gene3D Vaccinia Virus protein VP39 184 282 IPR029063 -
Bma14g00368 311 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 71 280 IPR029063 -
Bma14g00368 311 PANTHER MRNA CAP GUANINE-N7 METHYLTRANSFERASE 182 306 - -
Bma14g00368 311 PANTHER MRNA GUANINE-7- METHYLTRANSFERASE 182 306 IPR039753 GO:0004482
Bma14g00368 311 PANTHER MRNA GUANINE-7- METHYLTRANSFERASE 3 184 IPR039753 GO:0004482
Bma14g00368 311 ProSiteProfiles mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56) domain profile. 24 287 IPR004971 -
Bma14g00368 311 MobiDBLite consensus disorder prediction 1 21 - -
Bma14g00368 311 Gene3D Vaccinia Virus protein VP39 45 183 IPR029063 -
Bma14g00368 311 CDD AdoMet_MTases 90 155 - -
Bma14g00368 311 Pfam mRNA capping enzyme 34 183 IPR004971 -
Bma14g00368 311 Pfam mRNA capping enzyme 185 281 IPR004971 -
Bma14g00368 311 PANTHER MRNA CAP GUANINE-N7 METHYLTRANSFERASE 3 184 - -
Bma14g00368 311 PIRSF ABD1 181 283 IPR016899 GO:0004482|GO:0006370
Bma14g00368 311 PIRSF ABD1 11 185 IPR016899 GO:0004482|GO:0006370
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00368 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] - ming:122060050 420.624
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g391 . . . . . . . . . . Cma01g01165 . . . . . Cpe02g00737 Bhi09g01965 Tan01g4483 . . Hepe01g1328 . . . . . . . . . . Cone9ag0116 . . Lsi04g01258 . Chy04g01032 . . . . . Bpe11g00516 . . Bma14g00368 . Cmo01g01220 . . . . Car16g00578 . . . . . . . . . Cla05g01557 Cam05g1664 Cec05g1669 Cco05g1709 Clacu05g1659 Cmu05g1552 Cre05g1664 . . . Cme04g00774
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004967 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 4 4 1 40
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g00368 Bma_Chr14 FPKM 54.416595 47.588692 26.464956 25.57921 14.831073 17.069063 17.773741 11.792223 11.76873 14.567642