Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00379 ATGGGTGTCTCAGGGAAATGGATAAAAGCACTGGTTGGTTTTAAAAAATCGGAAAAGTCGCGATCTTCAGAAAAAGATCACAACGTGGGTACCTCCACACCTGGGAGTAAGATCCGACATCGTAGAAAGCACTCTCTCGAGTTTGATGCGGATAATCTTCAGTCTGAAATGGATCTAGATAGCACCTCATTAGTTGAGGATGCTAATGGTCATACTGATCGATATCCTGGTGGTTTGCCTTCAAATTCACTTCAGTTACTTGACATTTCACAGAGTCCTAAGAATGAAAGAGAAGAGTGGGCTGCCACACGAATCCAAACAACCTTTCGAAGATTTCTGGCTAGGAGAGCTCTCCGAGCTTTGAAAGGATTAGTGAGACTTCAAGCTCTTGTCAGGGGTCATGCCGTCAGAAAGCAAGCTGCAATAACACTTCGATGTATGCAAGCTTTAGTGAGAGTTCAGGCTCGGGTCAGAGCAAGGCACGTTCGTCTCGCATTAGAAAGTGAAACATCTCAACAAAAGCGTCAACAACAACTTGAAAATCAGGCTCGTGTTAGAGAAATAGAGGTAAGGAAGGTAGCATTCCTTTATTACCGAAGATGGAAGAAAAACACTACTCATGGATCTACTATGGTTATGATGCAGGAAGGGTGGTGTGACAGTGTAGGATCTGTTGAAGAAATTCAAGCCAAGTTGTTAAAGAGGCAGGAGGCTGCAACCAAGCGTGAGAGAGCCATGGCATATGCTCTGGCTCATCAGTGGCAAGCAGGATCAAGACAGCAGACTGCTCAATCAGGGTTTGAACCAGATAAGAGCAGCTGGGGTTGGAATTGGTTGGAAAGATGGATGGCCGTCCGTCCTTGGGAGAATCGTTTTCTTGACATTAATCTCCGAGATGGAGTGATGATACGAGAGGATGAATCGGCCGAGGCTAGACATAGCAGTGGATCTCAGTCAAAAGCTAGTGGAAAGAAGCCTCATTTTTCAGTTGTCTCAAACCAGAAAACCGCCCCTTCTAATTCCGAGGGCTCTGATTCTTCTCCCAGTAAATCAGCAGGCCTGCTAGAGTCAATGGCGCCCCAGAAGCCAAAGTCTAAGCCTTCTTATGAAAAGACAGCTGAAGAAGTCAAAAAACCAGTTGTTAGATCAAGAGGCCTCAGCAATCCGAAAGAGCGATCGACTCCGTTAGATAAACCGGCAGAAAAGCGGCTATCTCTGCCTAATACCAGTGAGCTCTCTCTCTCTCTCTTCCTTGCTAGAACGCTCAAGTTTAAAATAAAACTTTCTGAACTGGCTTTCTTCAGTTATAGCAATTAG 1317 45.18 MGVSGKWIKALVGFKKSEKSRSSEKDHNVGTSTPGSKIRHRRKHSLEFDADNLQSEMDLDSTSLVEDANGHTDRYPGGLPSNSLQLLDISQSPKNEREEWAATRIQTTFRRFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARHVRLALESETSQQKRQQQLENQARVREIEVRKVAFLYYRRWKKNTTHGSTMVMMQEGWCDSVGSVEEIQAKLLKRQEAATKRERAMAYALAHQWQAGSRQQTAQSGFEPDKSSWGWNWLERWMAVRPWENRFLDINLRDGVMIREDESAEARHSSGSQSKASGKKPHFSVVSNQKTAPSNSEGSDSSPSKSAGLLESMAPQKPKSKPSYEKTAEEVKKPVVRSRGLSNPKERSTPLDKPAEKRLSLPNTSELSLSLFLARTLKFKIKLSELAFFSYSN 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4537470 4540190 + Bma010802.2 Bma14g00379 94360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00379 438 Pfam IQ calmodulin-binding motif 100 119 IPR000048 GO:0005515
Bma14g00379 438 MobiDBLite consensus disorder prediction 367 385 - -
Bma14g00379 438 ProSiteProfiles IQ motif profile. 122 149 IPR000048 GO:0005515
Bma14g00379 438 MobiDBLite consensus disorder prediction 15 44 - -
Bma14g00379 438 MobiDBLite consensus disorder prediction 314 354 - -
Bma14g00379 438 PANTHER IQ-DOMAIN 5-RELATED 180 410 - -
Bma14g00379 438 PANTHER IQ-DOMAIN 5-RELATED 2 172 - -
Bma14g00379 438 Gene3D - 95 149 - -
Bma14g00379 438 PANTHER IQ-DOMAIN 5-RELATED 180 410 - -
Bma14g00379 438 PANTHER IQ-DOMAIN 5-RELATED 2 172 - -
Bma14g00379 438 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
Bma14g00379 438 MobiDBLite consensus disorder prediction 308 404 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma11g00338 Bma14g00379 CCT
Bma07g01423 Bma14g00379 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02209 Bma-Chr1:79004323 Bma14g00379 Bma-Chr14:4537470 2.95E-50 dispersed
Bma11g01010 Bma-Chr11:45765929 Bma14g00379 Bma-Chr14:4537470 6.25E-32 dispersed
Bma14g00379 Bma-Chr14:4537470 Bma08g01144 Bma-Chr8:50511458 2.64E-33 dispersed
Bma14g02027 Bma-Chr14:43594429 Bma14g00379 Bma-Chr14:4537470 2.01E-15 transposed
Bma14g00379 Bma-Chr14:4537470 Bma07g01423 Bma-Chr7:50036173 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00379 - - tcc:18590191 459.144