Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00412 ATGGCGGCCGAAAGAGTTGCGGGGACTGGTTTAGTAGAATCTGGACCTTCCGATCACCATTTTCCCCGTGCTGTTTTTTACAAAGTTGATGATACTCGCACAAGTTTCATTAATCAAGGGCCAAGTTTTGATTTTGGAGAGCTGGAAGAAGCAATTGTTCTGCAAGGAGTTGGGTTGAGAAATGATGAAGCCAGAGCACCTCTTTTCACAGGAAAGCCAGCTACTTTGGAAATTTTCCCTACCTGGCCTATGAGATTCCAACCAAGCCATATAGCAGGGAGTTCAAAGTCAGGAGTGGAGAGCAGTGATTTGGGACCAGCTATGAACAAGCTCACTGCAAGCAAAGCTGAGGGCTACTCAGAACAAGAATCTCCGATGAGTAAAAAGTCGTCTTCCTCTTCAGATAATCAGGGTTTTGATCAGAATGTTGATCTGCGATTTCAACGGCCAGAAAAGAAGAAAGGAACCGGTTCAAAATCAGAGAAGCCACTCGATGCCAAGACGTCCAGACGTTTGGCTCAAAACAGAGCAGCAGCCAAAAAGAGTCGTCTCAGAAAAAAGGCTTACATACAGCAGCTGGAAGCAAGTAGAATGAAGCTTTCTCAGATTGAACAAGACCTCCGACGATCTCACTCTCAGGGATTGTTCTCTGCTTCTTCTGATGCTCACATAAGCTCCGGAGCTGTAGTTTTCGACATGGAATATACGAGATGGCTAGAGGACGATCAGAGGCAGATGACTGAGCTAAAATCGGCTTTGGAGGCGCACTTATTGGACCACGATCTCCAATCAACAGTAGATGAGTACATTTCTCATTACGATGAAATTTTCCGGCTAAAAGGGGCGGTAGCCAAATCCGACGTCTTCCATCTGATTTCTGGAAAGTGGATATCACCGGTCGAGAGATATTTTCTCTGGATGGGTGGCTTTAGACCCTCTGAACTCATCAAGATTTTAATATCACAACTAGACCCTCTAAGCGAACAGCAAGCAATGGGAATATATAAGCTGCAAAATTCTACACAACAGGCGGAGGACTCTCTATCCCAAGGCCAAGAACAACTCCAGCAATCTCTGCTAGACACCATAGCCGGTGGGCCGATCATCAACGGCATGAACCAGATGTTCATGGCCGTCGGCAAGCTTTCCAATCTTGGAGGTTTAGTTCGACAGGCTGATATTTTGAGACAGCAAACACTTCATCAATTATGTCGAATATTAACAACACGACAAGCCGCACAGTGTTTTGTTGTGATCGGAGAATATTACAGCAGGCTAAGAGCCCTCGGCTCTATATGGGCGACTCGGCCTCGAGAGGCATTGATGAATGATGGAATCTCGTGCCAGACAATCATGGAGATGCAGATGATAATCGAACCTCCACAGAATCATTTTTCAGACCATAGTTAA 1410 45.6 MAAERVAGTGLVESGPSDHHFPRAVFYKVDDTRTSFINQGPSFDFGELEEAIVLQGVGLRNDEARAPLFTGKPATLEIFPTWPMRFQPSHIAGSSKSGVESSDLGPAMNKLTASKAEGYSEQESPMSKKSSSSSDNQGFDQNVDLRFQRPEKKKGTGSKSEKPLDAKTSRRLAQNRAAAKKSRLRKKAYIQQLEASRMKLSQIEQDLRRSHSQGLFSASSDAHISSGAVVFDMEYTRWLEDDQRQMTELKSALEAHLLDHDLQSTVDEYISHYDEIFRLKGAVAKSDVFHLISGKWISPVERYFLWMGGFRPSELIKILISQLDPLSEQQAMGIYKLQNSTQQAEDSLSQGQEQLQQSLLDTIAGGPIINGMNQMFMAVGKLSNLGGLVRQADILRQQTLHQLCRILTTRQAAQCFVVIGEYYSRLRALGSIWATRPREALMNDGISCQTIMEMQMIIEPPQNHFSDHS 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4841704 4844590 + Bma010840.1 Bma14g00412 94393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00412 469 SMART brlzneu 163 221 IPR004827 GO:0003700|GO:0006355
Bma14g00412 469 Coils Coil 186 206 - -
Bma14g00412 469 MobiDBLite consensus disorder prediction 145 169 - -
Bma14g00412 469 Pfam bZIP transcription factor 166 209 IPR004827 GO:0003700|GO:0006355
Bma14g00412 469 PANTHER TRANSCRIPTION FACTOR TGA9 64 446 - -
Bma14g00412 469 Coils Coil 239 259 - -
Bma14g00412 469 SUPERFAMILY Leucine zipper domain 167 209 IPR046347 GO:0003700|GO:0006355
Bma14g00412 469 MobiDBLite consensus disorder prediction 115 143 - -
Bma14g00412 469 PANTHER TRANSCRIPTION FACTOR TGA9 64 446 - -
Bma14g00412 469 Pfam Seed dormancy control 245 320 IPR025422 GO:0006351|GO:0043565
Bma14g00412 469 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 170 185 IPR004827 GO:0003700|GO:0006355
Bma14g00412 469 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 165 209 IPR004827 GO:0003700|GO:0006355
Bma14g00412 469 ProSiteProfiles DOG1 domain profile. 228 436 IPR025422 GO:0006351|GO:0043565
Bma14g00412 469 Gene3D - 166 215 - -
Bma14g00412 469 MobiDBLite consensus disorder prediction 115 184 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma11g00226 Bma14g00412 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00450 Bma-Chr9:38408257 Bma14g00412 Bma-Chr14:4841704 1.30E-06 dispersed
Bma14g00412 Bma-Chr14:4841704 Bma15g00081 Bma-Chr15:916771 2.25E-94 dispersed
Bma11g00226 Bma-Chr11:2012367 Bma14g00412 Bma-Chr14:4841704 2.60E-176 wgd
Bma14g00412 Bma-Chr14:4841704 Bma07g01446 Bma-Chr7:50182347 9.02E-81 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58311 PF14144 DOG1 3.60E-29 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00412 K14431 - jre:109013359 558.14