Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00419 ATGAGCGCGTTGAGCAGGACTGTAGCAATCAATCCTAATTTACGATTCTACCACTCCATTCAATCCTCGTCTCCTTCAAACACACTAGTTCTGGTTCTTCCCTCGTTAATCCGCTCTGCATGCTTGCGAAATTCCACCTCTCTTCCGATTTCCCGTAATTTCTATCTTTCTTTTCCTCTTGGTTCTTCGATCAGATCTTCAATGGCTGCTTCTACTCCATTCATGGATGCAGAGACAAAACGCTTCTCTGTCCTTTTCGTATGTCTTGGTAACATCTGTAGAAGTCCAGCTGCTGAAGGGGTCTTCACGGATTTGGTTAAGAAAAAGGGTTTAGATTCGAAATTTAGGATCGATTCTGCCGGCACAATTAATTATCACGAGGGAAATCAAGCTGATCCAAGAATGAGAGCTGCCTCCAAAAAGCGAGGAGTAGAAATAACATCCATATCAAGGCCAATTCGACCATCAGATTTTAGAGATTTTGATCTTATTCTCGCAATGGATAAGCAAAACAGAGAGGATATATTGGAGGCTTTCAATCGATGGAAACTGAGAGATACCTTGCCTCCAGATGGACACAAAAAGGTGAAGTTAATGTGCTCCTATTGTAAGAAACATGATGAAACCGAAGTTCCAGACCCCTATTATGGCGGAGCAAAAGGCTTTGAGAAGGTTTTGGACATACTTGAAGATGCTTGTGAATCACTGTTAGAAAGCATCGAGGCAGAGAAAACTACCCGTATCGGCTCTTAA 753 42.36 MSALSRTVAINPNLRFYHSIQSSSPSNTLVLVLPSLIRSACLRNSTSLPISRNFYLSFPLGSSIRSSMAASTPFMDAETKRFSVLFVCLGNICRSPAAEGVFTDLVKKKGLDSKFRIDSAGTINYHEGNQADPRMRAASKKRGVEITSISRPIRPSDFRDFDLILAMDKQNREDILEAFNRWKLRDTLPPDGHKKVKLMCSYCKKHDETEVPDPYYGGAKGFEKVLDILEDACESLLESIEAEKTTRIGS 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4942015 4943949 + Bma010848.1 Bma14g00419 94400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00419 250 Pfam Low molecular weight phosphotyrosine protein phosphatase 84 237 IPR023485 -
Bma14g00419 250 Coils Coil 226 246 - -
Bma14g00419 250 Gene3D - 64 246 - -
Bma14g00419 250 SMART LMWPc_2 82 239 IPR023485 -
Bma14g00419 250 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 55 245 - -
Bma14g00419 250 CDD LMWPTP 83 238 - -
Bma14g00419 250 SUPERFAMILY Phosphotyrosine protein phosphatases I 81 240 IPR036196 -
Bma14g00419 250 PRINTS LMW phosphotyrosine protein phosphatase signature 84 101 IPR017867 GO:0004725|GO:0006470
Bma14g00419 250 PRINTS LMW phosphotyrosine protein phosphatase signature 127 143 IPR017867 GO:0004725|GO:0006470
Bma14g00419 250 PRINTS LMW phosphotyrosine protein phosphatase signature 211 226 IPR017867 GO:0004725|GO:0006470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00419 K25307 - mnt:21392344 336.65