Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00420 ATGGAGTTGAACAATGACACTGAAACGGAGGGAACTGAAAGCCCTGACAACGGAAGAGAAAAGCCGATGGTCGTCGTAATAATGGGGCCCACCGGTTCAGGGAAGTCCCGCCTCGCTATAGATTTAGCTTCCCACTTCCCTGTCGAGGTCATCAACGCCGACTCCATGCAGGTCTATAGAGGTCTCGACGTTCTCACCAATAAGGTTCCCGAATCTGACCAAAAGGGAGTCCCTCATCATTTACTGGGAACAGTTGATACCAACGTAGAGTTCACAGCAAAAGAGTTTCGTGATTGTGCAATTCCTATCATTGAAGACATATTATCTCGCAACTGCCTGCCAGTCATAGTTGGGGGTACAAATTACTATATCCAGGCTCTTGTTAGCCCATATCTTCTAGATGATTCAGCAGAAGATGTGGATGGAACCTGCTCAAATGATATAGGAGACGAAGAGCTAGATAAAGATTTGGATTTTGGACGAGACAGTTTCAGCTATAGCTATAATGATCTTAAAGAGATTGATCCAGTCACTGCAAATAGGATCCATCCCAATGACAAAAGAAAAATTAGTCAACACCTATGTTTGTATTACCGTTATGGTGTTCTTCCCAGCAAAATATTTCAGGGAAAGGCTGCGGAGAATTGGGGTCGACCGAAGTGTTTCCGATACAACTGTTGTTTTGTAAGTATGGAAGTATCTCTCTCTGTACTGGACCAACATGTGAATCAGAGAGTGGATGACATGGTAGCTGCTGGATTACTTGATGAAGTCTTTGACATTTATAATCTTAATGTGGATTATACTCGAGGTTTGCTGCAAGCCATCGGTGTCCGAGAATTCGAAGAGTTTTTGAAACATTATATATTTGAAGGTAGATGCAATGGAGAGACTGAATTAACCGAGGAGTGGATGAACGGGAGGCATAAATTTTTGAAAGAGAAAATGAGAGTACTCCTTACTTCATCGGTTGACAACTATTCCCAATTACTCTTAGAAGATGCTATAGCCAAAGTAAAGTTGAACACCAGAAGACTTGCTCGTCGGCAGAGGAGGAGACTGAATAGACTACAGACATTATTTGGGTGGAACATACATTACATTGATGCCACAGAATCAATAGCATGCAAATCAGATCATTCGTGGACTACGCAAGTTCTTGAGCCTGCCATTGAAATAGTCAGATCTTTCCTCGATAAGGACACCCAATCAGTGACTGACCTGGGGGTCCCAAATATTCCTGATGTGAAAACTATCCAACGAGACTTGTGGACTCAGTATACGTGCAAGGCTTGTGGAAACAGAGTACTTAGAGGAAGACATGAGTGGGAAGAACATATACAAGGCCGACGGCATAGAAAACGTGTATCTCGGCTTAGAAAAACTAATGATTTACTCTTGTCAGACCTTCAACTGCTGTGA 1422 42.76 MELNNDTETEGTESPDNGREKPMVVVIMGPTGSGKSRLAIDLASHFPVEVINADSMQVYRGLDVLTNKVPESDQKGVPHHLLGTVDTNVEFTAKEFRDCAIPIIEDILSRNCLPVIVGGTNYYIQALVSPYLLDDSAEDVDGTCSNDIGDEELDKDLDFGRDSFSYSYNDLKEIDPVTANRIHPNDKRKISQHLCLYYRYGVLPSKIFQGKAAENWGRPKCFRYNCCFVSMEVSLSVLDQHVNQRVDDMVAAGLLDEVFDIYNLNVDYTRGLLQAIGVREFEEFLKHYIFEGRCNGETELTEEWMNGRHKFLKEKMRVLLTSSVDNYSQLLLEDAIAKVKLNTRRLARRQRRRLNRLQTLFGWNIHYIDATESIACKSDHSWTTQVLEPAIEIVRSFLDKDTQSVTDLGVPNIPDVKTIQRDLWTQYTCKACGNRVLRGRHEWEEHIQGRRHRKRVSRLRKTNDLLLSDLQLL 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4947099 4951566 + Bma010849.1 Bma14g00420 94401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00420 473 Gene3D - 22 413 IPR027417 -
Bma14g00420 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 130 IPR027417 -
Bma14g00420 473 Pfam IPP transferase 57 352 - -
Bma14g00420 473 TIGRFAM miaA: tRNA dimethylallyltransferase 24 319 IPR018022 GO:0008033
Bma14g00420 473 Gene3D - 148 211 - -
Bma14g00420 473 SUPERFAMILY beta-beta-alpha zinc fingers 409 460 IPR036236 -
Bma14g00420 473 Gene3D Classic Zinc Finger 422 465 - -
Bma14g00420 473 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 20 403 - -
Bma14g00420 473 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 20 403 IPR039657 -
Bma14g00420 473 SMART ZnF_U1_5 424 459 IPR003604 GO:0003676|GO:0008270
Bma14g00420 473 MobiDBLite consensus disorder prediction 1 21 - -
Bma14g00420 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 339 IPR027417 -
Bma14g00420 473 Hamap tRNA dimethylallyltransferase [miaA]. 24 399 IPR018022 GO:0008033
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01537 Bma-Chr6:51726041 Bma14g00420 Bma-Chr14:4947099 9.90E-18 dispersed
Bma14g00258 Bma-Chr14:3056199 Bma14g00420 Bma-Chr14:4947099 2.44E-20 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00420 K00791 - qsu:111983693 612.838