Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00435 ATGGGCCAAATTCAGTATTCCGAGAAGTATTTCGATGACACGAACGAGTTCCCAAGAATCGTCTTCTCACCGAAAGTAATTCGATACGTCGATTCTCAGAAACTGTACGCAATATTTCATATTGTATTTGGTTTGCAGAATGAATGGCGAGCAATCGGGGTTCAGCAGAGTCATGGGTGGGTGCAATACGCGATTCATCATCCTGAGCCTCACATCATGTTATTCAGGAGGCCATTGAACTACCAACAACAGCAGAAGAATTAA 264 43.18 MGQIQYSEKYFDDTNEFPRIVFSPKVIRYVDSQKLYAIFHIVFGLQNEWRAIGVQQSHGWVQYAIHHPEPHIMLFRRPLNYQQQQKN 87
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5061378 5061885 + Bma010864.1 Bma14g00435 94416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00435 87 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Bma14g00435 87 PRINTS Cyclin-dependent kinase regulatory subunit signature 48 62 IPR000789 GO:0016538
Bma14g00435 87 PRINTS Cyclin-dependent kinase regulatory subunit signature 63 77 IPR000789 GO:0016538
Bma14g00435 87 SMART CKS_2 3 80 IPR000789 GO:0016538
Bma14g00435 87 Gene3D - 1 87 IPR036858 GO:0016538
Bma14g00435 87 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 87 - -
Bma14g00435 87 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 87 - -
Bma14g00435 87 SUPERFAMILY Cell cycle regulatory proteins 1 85 IPR036858 GO:0016538
Bma14g00435 87 Pfam Cyclin-dependent kinase regulatory subunit 4 78 IPR000789 GO:0016538
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00173 Bma14g00435 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00485 Bma-Chr6:22759195 Bma14g00435 Bma-Chr14:5061378 7.27E-29 dispersed
Bma14g00435 Bma-Chr14:5061378 Bma07g00173 Bma-Chr7:2281998 2.32E-32 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00435 K02219 - twl:120017141 122.094