Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00475 ATGGCGGATATGACTCAGAATAGCATCGCTGATTTTCCGGCTGTCCCGACTCACGGAGGTCAATTCGTCCAGCACAACATATTCGGAAATTTCTTTGAGATCACTGCCAAGTATCGTCCTCCGATCATGCCAATAGGTCGTGGAGCATACGGAATCGTCTGCTCGGTTTTAAACGCAGAAACCAACGAGATGGTTGCGATAAAGAAAATAGCCAACGCGTTTGACAATCACATGGATGCAAAGCGAACGCTCAGAGAGATTAAGCTGCTTCGGCATTTGGATCACGAAAACATCATAGGTATTAGAGACGTTATTCCTCCACCTTTACGAAGAGAATTTACAGATGTATACGTTGCCACCGAGCTAATGGATACTGACCTTCACCAAATTATACGCTCCAATCAAGGTTTATCTGAAGAGCACTGTCAGTACTTAAAGCTAGCCCAATCAACGATTCAAATTACCCCAACTTATACAACTTTATGTTCTAATAGGCTTATTTTAAAATTGCAACTTCTCGGAACACCTACTGAGTCTGATCTTGGGTTTGTTAGAAATGAGGACGCTAGACGATATATTCGACAACTTCCACAACACCCTCGTCAACCACTCACGCTGGTGTTTCCTCATGTTCATCCCTTAGCAATTGATCTTATTGACAAGATGTTGACTTTTGATCCCACAAGGAGAATAACTGTTGAAGAAGCCTTAGCCCATCCATATCTCGAAAGATTACATGACATAGCTGATGAGCCTGTCTGCCCTGAGCCTTTCTCCTTCGACTTTGAGCAACAACCTTTAGGAGAAGAGCAAATGAAGGATATGATTTACATGGAGGCCTTATCATTCAACCCTCACCTTGCATAA 867 42.91 MADMTQNSIADFPAVPTHGGQFVQHNIFGNFFEITAKYRPPIMPIGRGAYGIVCSVLNAETNEMVAIKKIANAFDNHMDAKRTLREIKLLRHLDHENIIGIRDVIPPPLRREFTDVYVATELMDTDLHQIIRSNQGLSEEHCQYLKLAQSTIQITPTYTTLCSNRLILKLQLLGTPTESDLGFVRNEDARRYIRQLPQHPRQPLTLVFPHVHPLAIDLIDKMLTFDPTRRITVEEALAHPYLERLHDIADEPVCPEPFSFDFEQQPLGEEQMKDMIYMEALSFNPHLA 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5360487 5363148 - Bma010905.1 Bma14g00475 94456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00475 288 ProSiteProfiles Protein kinase domain profile. 39 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g00475 288 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 167 286 - -
Bma14g00475 288 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 145 - -
Bma14g00475 288 Gene3D Phosphorylase Kinase; domain 1 22 122 - -
Bma14g00475 288 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 145 - -
Bma14g00475 288 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 167 286 - -
Bma14g00475 288 Gene3D Phosphorylase Kinase; domain 1 257 280 - -
Bma14g00475 288 SUPERFAMILY Protein kinase-like (PK-like) 21 283 IPR011009 -
Bma14g00475 288 SMART serkin_6 39 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g00475 288 Gene3D Transferase(Phosphotransferase) domain 1 123 145 - -
Bma14g00475 288 Gene3D Transferase(Phosphotransferase) domain 1 170 256 - -
Bma14g00475 288 ProSitePatterns Protein kinases ATP-binding region signature. 45 69 IPR017441 GO:0005524
Bma14g00475 288 Pfam Protein kinase domain 44 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g00475 Bma-Chr14:5360487 Bma14g01860 Bma-Chr14:39982154 2.77E-51 dispersed
Bma14g00475 Bma-Chr14:5360487 Bma14g00476 Bma-Chr14:5373465 1.70E-35 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66880 PF00069 Pkinase 6.00E-17 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00475 K20536 - vvi:100263976 274.248