Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00476 ATGGATTCGAAGACTGAATCTCTGGCTGCCGCAAGAAAAGGACTCTCTACGCACGCCGGGAAATACGTTAAATACAATGTTCTCGGGAATCTATTCGAGGTCTCCGCTAAGTACGTTCCTCCGATCCAACCGGTTGGTCGAGGTGCGTACGGAATCGTTTGCTGTGCTTCGAATTCGAATACGAATGAAGAAGTTGCAATCAAGAAGATTGGGAATGCATTTGACAACAGGATTGATGCCAAAAGGACACTTCGAGAGATTAAACTCCTTTGCCATATGGATCATGATAATATAATTAAAATTAAGGACATTGTTCTACCACCGGAGAAGGAAAACTTCAATGACGTGTATATTGTCTATGAATTAATGGATACTGACCTGCATCAGATAATACGATCTACTCAGGATCTGACTGATGATCACTGTCAGTATTTCCTGTACCAATTATTGAGGGGTTTGAAATATGTGCATTCGGCAAATGTTTTGCATCGAGATTTGAAACCAAGCAACCTGCTTCTCAATTCCAATTGTGACCTCAAGATTTGTGACTTTGGGCTAGCTAGAACTACCTCAGAGTCAGACTTCATGACGGAATATGTTGTGACTAGATGGTACCGTGCCCCTGAACTGCTTCTCAATTGTTCAGAATACACAGCAGCGATTGATATTTGGTCAGTAGGGTGCATTCTTATGGAAATTATAAGAAGGGAGCCACTATTTCCTGGCAAAGACTACGTCCAGCAATTGGGGCTTATCACTGAGCTGCTAGGTTCTCCAGACGATTTGGATCTGGGATTTCTTAGAAGTGATAATGCGAGGAAGTATGTGAAGCAACTCCCACATTTTTCTAAACAACCCTTTGCTCAAAAGTATCCGGATCTGTCTCCGTTGGCAATTGATCTTGCAGAGAAGATGCTTGTTTTTGACCCAAACAAACGAATAAGTGTTGACGAGGCATTGAATCACCCATATCTATTATCTCTCCATGAGATCAATGAGGAGCCGATTTGCTCTTCTCCATTTTTCTTCGATTTCGAGCATGCCACCTTGAGCGAAGAAGATATAAAGAGCTCATATGGGGAGAAGCCCTCAAATTTAATCCAGATTTTCTGA 1113 42.05 MDSKTESLAAARKGLSTHAGKYVKYNVLGNLFEVSAKYVPPIQPVGRGAYGIVCCASNSNTNEEVAIKKIGNAFDNRIDAKRTLREIKLLCHMDHDNIIKIKDIVLPPEKENFNDVYIVYELMDTDLHQIIRSTQDLTDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNSNCDLKICDFGLARTTSESDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILMEIIRREPLFPGKDYVQQLGLITELLGSPDDLDLGFLRSDNARKYVKQLPHFSKQPFAQKYPDLSPLAIDLAEKMLVFDPNKRISVDEALNHPYLLSLHEINEEPICSSPFFFDFEHATLSEEDIKSSYGEKPSNLIQIF 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5373465 5376170 + Bma010907.1 Bma14g00476 94457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00476 370 ProSiteProfiles Protein kinase domain profile. 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g00476 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Bma14g00476 370 Gene3D Phosphorylase Kinase; domain 1 22 122 - -
Bma14g00476 370 SUPERFAMILY Protein kinase-like (PK-like) 42 331 IPR011009 -
Bma14g00476 370 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 17 357 - -
Bma14g00476 370 Pfam Protein kinase domain 43 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g00476 370 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 17 357 - -
Bma14g00476 370 SMART serkin_6 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g00476 370 CDD STKc_TEY_MAPK 32 356 - -
Bma14g00476 370 ProSitePatterns MAP kinase signature. 74 177 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bma14g00476 370 ProSitePatterns Protein kinases ATP-binding region signature. 45 69 IPR017441 GO:0005524
Bma14g00476 370 Gene3D Transferase(Phosphotransferase) domain 1 123 343 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g00476 Bma-Chr14:5373465 Bma14g00601 Bma-Chr14:6518582 0 dispersed
Bma14g00475 Bma-Chr14:5360487 Bma14g00476 Bma-Chr14:5373465 1.70E-35 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66881 PF00069 Pkinase 2.50E-70 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00476 K04371 K20600 nnu:104594729 645.195