Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00490 ATGTCTTTCTGTAACAAGGGCTTTTGGATGGATAAAGGTTCTGAATTTCTTACTGATCCAAATTCAACTTGTGATGACCCTTCACGAATACAAACAAAGCGATCTCAACAGTGGTTTGTAGATGCTGCTGACTCGGACATCTTTCCCAACAAGAAGCGAGCGATACAAGCTCCAAATAGTAAAATGAGTTACGAGTTCCCAATTGCTAACATTTCTCCCTGGGAGAATGCGTCCAATTTTCAATTAGTCCCAAATCACTTTATTGATCGAATGTTTGGATCTGAAACTGCACGGCCAATTCAATATCCCAGCAGAGACTTATCTTCTGTGCGAGCTGATAGTTTGAATTCGAGCAGCCAATTCGAAGGAGATGCATCTATTGGCTTGTCCATATCTCATGCTATGGAAGATCGTGGAGCATCTTCAATTTATGGCGAATTGAGAAAAGTTAAAGATGATAACGTGGAAAACGACCTTGATATTTACAATCTGAGGGGGCATAATTCTTTCAGGGAAAATAACCATGATCTGACAGTAGAACAGCTCCATTCCAGAAAAATAAGCAGTGGTTTCGATTCAAGTAGGCAATCCTATAAAGAGGATGGTGGTGTCACATTGATGGACCATTCATGCAACAGAGGTGATGCGCATGGGAAGTTACTAGGCCTCGGATTTGGAAAGGAAGATAACATTGCAATGCCAATTGGTGATACCTATTATAAAGCAGATTCCAACATAATATCTTTTGGCGGGTTTCCTGAAGAACATGATATTGTGCCATTTGGTCGGCCTATTGGCAGCTGTGATGTCTCGTACAATCAATCTGTTCAAGTATCCGGAACGCCCTACGAGAAGGCATTGGATGGATCAAATGCCAGTGCAGTATCTAGCTCTAGTCGAACTTCTAAATTAAAACCTGAAACTACTACAAAGAGTAAATCAGAATTTAAAACATCGAGGAAAGAAGCTCCCAATAGTTTCCCTTCAAATGTCAGAACTTTGATATCCACTGGTATGCTTGATGGTGTTCCAGTCAAGTACATCTCCTTGGCACGGGAGGAACTTCGTGGGATTATCAAAGGCTCTGGCTATCTTTGTGGTTGTCAATCATGTAACTTTTCTAAGGTGCTTAATGCTTACGAATTTGAGAGGCATGCCGGCAGCAAAACTAAACATCCGAATAATCATATTTACTTCGAGAATGGGAAGACTATTTACCAGATAGTACAAGAATTGAGGAGCACACCTCAAAGCTGCTTGTTTGATACAATTCAAACTGTATTTGGTGCTCCAATCAATCAAAAATCTTTCCGCATTTGGAAAGAATCATTTCAAGCAGCTACAAGAGAGCTTCAGCGAATTTATGGAAAGGAAGAGCTGAACCTGTAG 1389 40.68 MSFCNKGFWMDKGSEFLTDPNSTCDDPSRIQTKRSQQWFVDAADSDIFPNKKRAIQAPNSKMSYEFPIANISPWENASNFQLVPNHFIDRMFGSETARPIQYPSRDLSSVRADSLNSSSQFEGDASIGLSISHAMEDRGASSIYGELRKVKDDNVENDLDIYNLRGHNSFRENNHDLTVEQLHSRKISSGFDSSRQSYKEDGGVTLMDHSCNRGDAHGKLLGLGFGKEDNIAMPIGDTYYKADSNIISFGGFPEEHDIVPFGRPIGSCDVSYNQSVQVSGTPYEKALDGSNASAVSSSSRTSKLKPETTTKSKSEFKTSRKEAPNSFPSNVRTLISTGMLDGVPVKYISLAREELRGIIKGSGYLCGCQSCNFSKVLNAYEFERHAGSKTKHPNNHIYFENGKTIYQIVQELRSTPQSCLFDTIQTVFGAPINQKSFRIWKESFQAATRELQRIYGKEELNL 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5556763 5558898 + Bma010923.1 Bma14g00490 94471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00490 462 MobiDBLite consensus disorder prediction 306 320 - -
Bma14g00490 462 MobiDBLite consensus disorder prediction 283 305 - -
Bma14g00490 462 PANTHER DNA-BINDING PROTEIN 1 462 - -
Bma14g00490 462 PANTHER AUTOIMMUNE REGULATOR 1 462 - -
Bma14g00490 462 MobiDBLite consensus disorder prediction 283 328 - -
Bma14g00490 462 Pfam Tify domain binding domain 357 412 IPR032308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00055 Bma-Chr10:559346 Bma14g00490 Bma-Chr14:5556763 9.96E-16 dispersed
Bma14g00490 Bma-Chr14:5556763 Bma03g00301 Bma-Chr3:2266443 2.05E-11 wgd
Bma14g00490 Bma-Chr14:5556763 Bma08g00988 Bma-Chr8:48980905 7.33E-25 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00490 - - qsu:111988714 553.132