Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma14g00501 | ATGGCGGAGGAGAAACGAGTTGTCGTACAGAGCCTGATCGAGGCAGTGAACGAGATTGCTTCTATCTCGGATTACAGGCACACTGTGAAGAAGGAGTATTGCAATTTAGCAAGGAGATTGAAGCTTCTGACTCCAATGTTCGAGGAAATCAGGGACAGCGGGGAGGCGCTCCCCGAGGAGACTCTGAAGGCTCTAGTTTCGTTAAAAGCAGCTCTGAAATCAGCTATAGAGTTGCTCAAATTCGGAAGCGAGGGAAGTAAGATTTACCTGGCTCTTGAAGTGGAGAATATTATGCACAAATTCCATGAGATAACAGCTCAGTTGGAGCAAGCTTTGAGCGGAATTTCCTATGATAATCTGGACGCATCTGATGAAGTTAAGGAGCAGGTTGAACTTGTTCTTGCCCAGTTTAGAAGAGCTAAAGGCAGGATTGATATGCCTGACGCACAGCTGCATGACGAGCTTGTATCACTATATCAGACGGTTACAGATCCATCTGTCGTACGGAGATTGGCTGAAAAATTGGATCTAACTGGAGTATCTGACCTTAAACAAGAATCACTGGCTTTGTCTGAGATGGCTATTGCCCGTGGTGATGACCCTGGAGAGACTTTTGAGAAGATGTTAATGCTCCTGAAGAAAATAAAAGATTTTGTATTGACAGAATACCCTGAAATGGATGATCCAGCTCAAGATAAAAGTATATCCTCTAGTAATGGAGTACAAGTATCTGGAGAAAGTAATTACAAATCTCCAGTTATTCCAGACGATTTTCGTTGCCCCATTTCTCTGGAATTGATGAAGGATCCTGTCATTGTTTCTACAGGCCAGACTTATGAACGTTCCTGCATTGAAAAGTGGCTGGAAGCAGGGCATGGAACATGTCCAAAGACGCAACAGACACTCTCCAGCACCACTCTTACGCCAAATTATGTCTTGCGTAGTCTCATAGCGCAGTGGTGTGAGGCAAATGGGCTTGAACCACCAAAGAGACCCAGTAGTTCTCAGTCTAAAACATCTGCTTGCTCACCTGCCGAACGCACTAAAATTGAAATTCTTCTTTGTAAACTAATGTCTGGCAACCCTGAAGACCAGCGTTGTGCTGCTGGTGAGATTCGCCTTCTGGCGAAGCGCAATGCGGATAACCGAGTAGCCATTGCCGAGGCCGGTGCAATCCCTCTTCTCGTGAGCCTCCTTTCAACGGCAGATTCACGCATACAAGAGCATGCAGTAACAGCACTTCTTAACCTTTCCATTTGTGAGGAGAATAAGGGAGCCATTGTGTCCTCTGGGGCTGTCCCAGGTATAGTTCACGTGCTCAAGAAAGGAAGCATGGAAGCTAGGGAAAATGCAGCAGCCACCCTTTTCAGCCTTTCTGTTGTGGATGGAAATAAAGTTACAATTGGTGCCTCTGGAGCCATTCCACCACTTGTCATGCTGCTTAAGTGA | 1449 | 45.89 | MAEEKRVVVQSLIEAVNEIASISDYRHTVKKEYCNLARRLKLLTPMFEEIRDSGEALPEETLKALVSLKAALKSAIELLKFGSEGSKIYLALEVENIMHKFHEITAQLEQALSGISYDNLDASDEVKEQVELVLAQFRRAKGRIDMPDAQLHDELVSLYQTVTDPSVVRRLAEKLDLTGVSDLKQESLALSEMAIARGDDPGETFEKMLMLLKKIKDFVLTEYPEMDDPAQDKSISSSNGVQVSGESNYKSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHGTCPKTQQTLSSTTLTPNYVLRSLIAQWCEANGLEPPKRPSSSQSKTSACSPAERTKIEILLCKLMSGNPEDQRCAAGEIRLLAKRNADNRVAIAEAGAIPLLVSLLSTADSRIQEHAVTALLNLSICEENKGAIVSSGAVPGIVHVLKKGSMEARENAAATLFSLSVVDGNKVTIGASGAIPPLVMLLK | 482 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 5627796 | 5630970 | - | Bma010932.1 | Bma14g00501 | 94482 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma14g00501 | 482 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 390 | 432 | IPR000225 | GO:0005515 | |
Bma14g00501 | 482 | MobiDBLite | consensus disorder prediction | 231 | 248 | - | - | |
Bma14g00501 | 482 | Gene3D | - | 7 | 118 | IPR036537 | GO:0007166 | |
Bma14g00501 | 482 | SUPERFAMILY | ARM repeat | 349 | 482 | IPR016024 | - | |
Bma14g00501 | 482 | CDD | RING-Ubox_PUB | 258 | 300 | IPR045210 | - | |
Bma14g00501 | 482 | ProSiteProfiles | U-box domain profile. | 253 | 327 | IPR003613 | GO:0004842|GO:0016567 | |
Bma14g00501 | 482 | Gene3D | - | 335 | 482 | IPR011989 | - | |
Bma14g00501 | 482 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 254 | 327 | IPR013083 | - | |
Bma14g00501 | 482 | SUPERFAMILY | RING/U-box | 245 | 330 | - | - | |
Bma14g00501 | 482 | MobiDBLite | consensus disorder prediction | 227 | 248 | - | - | |
Bma14g00501 | 482 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 6 | 481 | - | - | |
Bma14g00501 | 482 | SMART | arm_5 | 379 | 419 | IPR000225 | GO:0005515 | |
Bma14g00501 | 482 | SMART | arm_5 | 420 | 460 | IPR000225 | GO:0005515 | |
Bma14g00501 | 482 | Pfam | Armadillo/beta-catenin-like repeat | 379 | 418 | IPR000225 | GO:0005515 | |
Bma14g00501 | 482 | Pfam | Armadillo/beta-catenin-like repeat | 421 | 459 | IPR000225 | GO:0005515 | |
Bma14g00501 | 482 | Pfam | U-box domain | 254 | 324 | IPR003613 | GO:0004842|GO:0016567 | |
Bma14g00501 | 482 | PANTHER | U BOX DOMAIN-CONTAINING | 6 | 481 | - | - | |
Bma14g00501 | 482 | SMART | Ubox_2 | 257 | 320 | IPR003613 | GO:0004842|GO:0016567 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma11g00122 | Bma14g00501 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma06g00574 | Bma-Chr6:30839405 | Bma14g00501 | Bma-Chr14:5627796 | 3.33E-07 | dispersed | |
Bma11g00077 | Bma-Chr11:858083 | Bma14g00501 | Bma-Chr14:5627796 | 1.20E-12 | dispersed | |
Bma11g00078 | Bma-Chr11:883286 | Bma14g00501 | Bma-Chr14:5627796 | 4.87E-14 | dispersed | |
Bma14g00501 | Bma-Chr14:5627796 | Bma14g01592 | Bma-Chr14:32906392 | 5.35E-08 | dispersed | |
Bma01g02371 | Bma-Chr1:81364659 | Bma14g00501 | Bma-Chr14:5627796 | 3.08E-16 | transposed | |
Bma07g00500 | Bma-Chr7:6167692 | Bma14g00501 | Bma-Chr14:5627796 | 3.90E-18 | transposed | |
Bma11g00122 | Bma-Chr11:1154400 | Bma14g00501 | Bma-Chr14:5627796 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma14g00501 | - | - | pvy:116146246 | 721.465 |