Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00512 TTGGCCGATGTGATGATGGAATTTTCTGGATCAGCTACGAGATACAATGGGGTTGAACTCAATCGTGGATTCATGGCTCCCGTTTCGTTTCCACCCAAATCAAATCAACATGGCCATGAAAGTATCTCGCCTCCATTTTCGAGCTCGAGCTCAGATGGCGATTCTTCTCCCGAAGGCAACGAAGTTTCAAAAGAAATTCTCAGGTATATCAGCGATATGTTGATGAACGAGGAGGATTTAGAGTGGAGGCCCTGTATGCTGCAGGAATGTTTAGCCTTCCAAGCTGCTGAAAAATCTTTCTCTGATGTTCTTAAAAATGAATCTCCCAATCCACCGATTCTTCCCCTTCATCATCTTCCAGATTATAACTCCGCCAATCAACCTGTTCATTCTACAATACCCAGAGATCGGATACCCAGAAACCAATTTCAGATCGCAGTCTCGGAATTTCAGAAACTCTCAGAAGACAGAAACTTTCATTCACCTCCTGGTTCAAATGGGAAGAGGAATCATCGAGGAATAACTGAGGAACAAGAAGGGAGGAGCCAAAAACTATCGGCGATTTCCAATGAGGCTTCCGAGCTGGCGGAGATCTTCGAAAAGGTTTTGCTATGTCAGCGTCAAAACCAGGAGGCAAAATCAACAACTGGGGAAGATAAGAAACTCAAAAACAAGCTTAAAAGTAGACCTAAATCAAGAAAGAAGAAAGAATTCGTGGATCTATGGAGTCTGTTAACTCAATGTGCACATGCAATGGCAAATTACGATCAACGAACAGCAAAAGAATCACTATTTCAGATCAGGCTACACTCTTCTGTAATCGGCGATGGAACTCAGAGATTGGCTTATTACTTCGCAAACGGCCTTGAAGCTCGGTTAGCAGCCGGGACGCCGTCGTATAATCACCTTCCCGGCAATGAAAACTCGGCAGCGGAAATCCTGAAAGCTTATCAGGTTTACGTTGGTGCTTGTCCTTACAAAAGAGTGTCGAACATTTTGGCAAACAAATCCATCGCAAAATTAGCAGAGAACTCGTCGAATCTTCATATTATTGATTTCGGAATTCTCTATGGCTTCCAATGGCCTTGCCTGATCCAGCTTCTTTCCCGTCGCTCCGGCGGATCCCCGAAGCTTCGTATAACCGGGATTGAGCTTCCTCAGCCAGGTTTCCGACCGACAGAGAGAGTCGAAGAGACGGGCCGGCGATTGAGAAACTACTGCAGGAAATTAAATGTGCCGTTTGAGTTTAATTTTATCGCGCAGAAATGGGAAACGATTAGGGTGGAAGATTTAAGGCTGGATGGAGGCGAACTGCTCGTAGTAAACTGTGTGGATCGATTAAAGAACATACCAGATGAAACAATGGGGGAGGATAGTCCGAGAGACACTGTTCTAACCTTAATCAGAAGCATAAACCCAAAGCTGTTCGTCCATGGCGTCGTCAATGGAACCTACAACGCCCCCTTTTTCGATTCGCGATTCAGAGAAGCGATTTTCCACTTCTCGTCGCAATTCGACATGTTGGAAGCGACGATCGAAAGAGAAAATCCACACAGGCTAGTGTTCGAGAGGGAAATTCTGGGGAGAGACGCCATTAATGCAATAGCATGCGAAGGGTTTCAGAGAATGGAAAGGCCAGAGTCGTACAAACAATGGCAGGTCAGGAACACTAGGGCTGGGTTCAAGCAGACGCCATTGGAGCGAGATATCGTGAAGAACGTGGAGAGCATCGTGAAATCAGATTACCATAAAAATTTTGTCGTAGTCGAAGATGGTAACTGGATGTTGCAGGGATGGAAGGGAAGAATCATCCATGCTCTCTCTTGTTGGGTTCCTTCATAG 1842 45.44 LADVMMEFSGSATRYNGVELNRGFMAPVSFPPKSNQHGHESISPPFSSSSSDGDSSPEGNEVSKEILRYISDMLMNEEDLEWRPCMLQECLAFQAAEKSFSDVLKNESPNPPILPLHHLPDYNSANQPVHSTIPRDRIPRNQFQIAVSEFQKLSEDRNFHSPPGSNGKRNHRGITEEQEGRSQKLSAISNEASELAEIFEKVLLCQRQNQEAKSTTGEDKKLKNKLKSRPKSRKKKEFVDLWSLLTQCAHAMANYDQRTAKESLFQIRLHSSVIGDGTQRLAYYFANGLEARLAAGTPSYNHLPGNENSAAEILKAYQVYVGACPYKRVSNILANKSIAKLAENSSNLHIIDFGILYGFQWPCLIQLLSRRSGGSPKLRITGIELPQPGFRPTERVEETGRRLRNYCRKLNVPFEFNFIAQKWETIRVEDLRLDGGELLVVNCVDRLKNIPDETMGEDSPRDTVLTLIRSINPKLFVHGVVNGTYNAPFFDSRFREAIFHFSSQFDMLEATIERENPHRLVFEREILGRDAINAIACEGFQRMERPESYKQWQVRNTRAGFKQTPLERDIVKNVESIVKSDYHKNFVVVEDGNWMLQGWKGRIIHALSCWVPS 613
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5700409 5702250 + Bma010943.1 Bma14g00512 94493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00512 613 MobiDBLite consensus disorder prediction 209 231 - -
Bma14g00512 613 ProSiteProfiles GRAS family profile. 232 611 IPR005202 -
Bma14g00512 613 PANTHER SCARECROW-LIKE PROTEIN 30 35 611 - -
Bma14g00512 613 MobiDBLite consensus disorder prediction 28 61 - -
Bma14g00512 613 MobiDBLite consensus disorder prediction 34 57 - -
Bma14g00512 613 MobiDBLite consensus disorder prediction 154 184 - -
Bma14g00512 613 Pfam GRAS domain family 243 610 IPR005202 -
Bma14g00512 613 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 35 611 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g00512 Bma-Chr14:5700409 Bma14g00364 Bma-Chr14:4406307 6.89E-63 dispersed
Bma14g00512 Bma-Chr14:5700409 Bma14g00513 Bma-Chr14:5703080 0 tandem
Bma14g00512 Bma-Chr14:5700409 Bma03g00133 Bma-Chr3:1012298 6.84E-175 wgd
Bma14g00512 Bma-Chr14:5700409 Bma07g00096 Bma-Chr7:1717763 5.45E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58319 PF03514 GRAS 2.00E-107 CL0063 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00512 - - zju:107411030 623.624