Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00520 ATGGCGGACATTTACCGCTCGGTGATGAGTGAGAGCTACGTCGGTCGTAGTGTCAGTCGAAGGAGATCGATGGACCACGAGAAGGTTGAATTTGAGCCTGAAATGGCTCCCCCGGAAATGGATGACCATCGAAAGCGTAAGAAACTAGAGGCTGTAGCTGATTCGTTTTCTAGAGACTGTAGAGACGCAGTGGATAGTTCTTCTTTAGACGAAGACAAGGGCTTCGTAAAGCTTGAATGTAGGAAACCAGAGATGGTGGAAAGCTCTCCGTCACCTCCGTCTTCGGACCTTTCCATATCGCTTCTCTGTCGATCTCCCGCAGCTCGAATAGCTCCAGAAGTTCCGGGAGAGAATCCGAGGTTTGGAGTGGTTTCGATTCGGGGAAGGCGAAGAGAAATGGAAGATGCGGTCGCCGTCCAACCATCGTTTTGCCGCATAGGAAATGAATCCAACCCTCACCTGCATTACTTCGCCGTTTACGACGGTCACGGTTGCTCTCATGTGGCGATCAAGTGCAAGGAGCGGTTGCACGAGCTGGTGAAGGAAGAGTTGGAAAGAGAGGTTGGATCATCTTCATCGAATGATTGGAAGAGCGCCATGGAAAGAAGCTTTCGGCGCATGGACCAGGAAGTCAGTTGGTGTAGTGAAAGAATTGCCAGTTCAAACTGCAGGTGCGAGCTTCATCCCCCAGAGTGCAATACGGTTGGAACTACAGCCGTGGCTGCTATTTTAACCCCTGAGAAGATCATCGTCTCTAACTGCGGCGACTCGAGGGCTGTTCTCTGTCGTAGCGGCAAACCAGTCCCTCTCTCCTCTGATCACAAACCGGATCGACCAGATGAACTGAATCGGATCGAAGCGGCCGGCGGGCAAGTGATCTACTGGGGAGGCCCAAGAGTTCTCGGAGTTCTAGCCACATCAAGAGCCATTGGTGATAACTATCTGAAGCCCTACGTAAGCTGCGACCCGGAAGTGACGATCACTGATCGGTCGCCGGAGGATGATTGTCTGCTAATAGGAACCGATGGACTTTGGGACGTCGTGTCCAACGAGACGGCATGCGAGGTGGCGCGCATGTGCCTCAAAGGCAAGTTTCAAAGGTTGCCGCCGCACTGCGCCCCAGCGAGCAGCGCAGTCGCTAGCCCAGAAATTCCTGACAAGGCATGCAGCGAGGCGGCAACATTGCTGAGCAAGTTGGCACTAGGCCGGAAAAGTGCTGACAATGTGAGCTTGGTAATCGTAGACCTCAGGAGGGGCAGATCGAATGCAGTCAACTAA 1278 53.05 MADIYRSVMSESYVGRSVSRRRSMDHEKVEFEPEMAPPEMDDHRKRKKLEAVADSFSRDCRDAVDSSSLDEDKGFVKLECRKPEMVESSPSPPSSDLSISLLCRSPAARIAPEVPGENPRFGVVSIRGRRREMEDAVAVQPSFCRIGNESNPHLHYFAVYDGHGCSHVAIKCKERLHELVKEELEREVGSSSSNDWKSAMERSFRRMDQEVSWCSERIASSNCRCELHPPECNTVGTTAVAAILTPEKIIVSNCGDSRAVLCRSGKPVPLSSDHKPDRPDELNRIEAAGGQVIYWGGPRVLGVLATSRAIGDNYLKPYVSCDPEVTITDRSPEDDCLLIGTDGLWDVVSNETACEVARMCLKGKFQRLPPHCAPASSAVASPEIPDKACSEAATLLSKLALGRKSADNVSLVIVDLRRGRSNAVN 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5779888 5781423 + Bma010951.1 Bma14g00520 94501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00520 425 CDD PP2Cc 120 416 IPR001932 -
Bma14g00520 425 MobiDBLite consensus disorder prediction 18 44 - -
Bma14g00520 425 Pfam Protein phosphatase 2C 121 408 IPR001932 -
Bma14g00520 425 ProSitePatterns PPM-type phosphatase domain signature. 156 164 IPR000222 GO:0043169
Bma14g00520 425 SMART PP2C_SIG_2 135 416 IPR001932 -
Bma14g00520 425 ProSiteProfiles PPM-type phosphatase domain profile. 120 416 IPR001932 -
Bma14g00520 425 Gene3D - 114 422 IPR036457 -
Bma14g00520 425 PANTHER PROTEIN PHOSPHATASE 2C 37 113 420 - -
Bma14g00520 425 MobiDBLite consensus disorder prediction 1 44 - -
Bma14g00520 425 PANTHER ALPHABET, ISOFORM E-RELATED 113 420 - -
Bma14g00520 425 SUPERFAMILY PP2C-like 119 417 IPR036457 -
Bma14g00520 425 SMART PP2C_4 110 414 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g00875 Bma14g00520 CCT
Bma07g00086 Bma14g00520 CCT
Bma11g00104 Bma14g00520 CCT
Bma05g00875 Bma14g00520 ECH
Bma07g00086 Bma14g00520 ECH
Bma11g00104 Bma14g00520 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g01106 Bma-Chr8:50040361 Bma14g00520 Bma-Chr14:5779888 1.10E-117 dispersed
Bma14g00520 Bma-Chr14:5779888 Bma15g00328 Bma-Chr15:3199290 1.49E-74 dispersed
Bma10g01171 Bma-Chr10:41120187 Bma14g00520 Bma-Chr14:5779888 2.57E-96 transposed
Bma11g00104 Bma-Chr11:1042831 Bma14g00520 Bma-Chr14:5779888 6.25E-134 wgd
Bma14g00520 Bma-Chr14:5779888 Bma03g00142 Bma-Chr3:1069355 7.05E-135 wgd
Bma14g00520 Bma-Chr14:5779888 Bma07g01553 Bma-Chr7:51002858 3.89E-13 wgd
Bma14g00520 Bma-Chr14:5779888 Bma07g00086 Bma-Chr7:1652327 5.97E-144 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00520 K14497 - jre:109017805 495.738