Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00540 TCACGAGTTTTGTACACTCTTCTGGAGATGGAACCACTTCTTCTCTTTTTCAGCGTATCAATTGTTTTATCAACCTATTTCTTGTGGTTTTATCTCCTCTCCAAGAAGCTCTCCGGTCCAAAAGTATGGCCGGTGATAGGCAGCCTACCTGAACTGTTTGCCAACCGGGAGAGAATCCATGAATGGATTGCTAACAATCTTCGAGCTGCCGCCGGTGGTTCGTCTACCTACCAGACTTGTACGATTGCTGTTCCTTTCTTCGCATTCAAACAAGGGTTTTACACAGTCACTTGCCACCCTAAGAACATCGAGCACATTCTCCGAACCCGGTTCGACAACTACCCGAAGGGACCCACGTGGCAAACCGCTTTTCATGATCTTCTAGGCCAAGGGATTTTCAACAGCGATGGAGAGACGTGGCTCATGCAACGTAAAACTGCAGCATTGGAGTTCACTACGAGGACGCTACGTCTAGCCATGGCTCGGTGGGTTAATCGAACCATCAAGACTAGACTGTGGTGTATTTTGGACAAGGCTGCAAATGAGAATTCGTCAGTAGATTTGCAGGATTTGTTGCTTCGTTTAACTTTTGATAATATTTGTGGTTTAACTTTCGGCAAAGACCCTGAAACTCTCTCTCTTAATTTGCCTGAGAATCCATTTGCTTTGGCGTTTGACACGGCCACTGAAGCAACTTTGCAGCGGCTTCTTTACCCTGGTTTCTTATGGAGGATTGAGAAACTTTTGGGCATTGGCAGAGAGAGGATGTTGAAGAAAAGTCTGAACATCGTAGAAAATTACATGAACGAAGCCATTGATGCTCGAAAGGAAGCTCCTTCTGACGATTTGCTCTCTCGTTTCTTGAAAAAGCGAGATTTGAGTGGAAATCTCTTCCCCGTGGCTGTTCTCCAACGTATTGCTTTAAATTTCGTCCTCGCCGGCCGGGACACATCCTCGGTCGCCCTCAGCTGGTTCTTCTGGCTGGTCATGAACCACCCCAATGTGGAGGAGAAGATCATCAAGGAGATATCAACAGTTCTGAAAGAAACACGTGGCGAAGATAAAAGCAAATGGACGGAGGATCCTCTGGTATTCGACGAGGCTGATCGGCTGGTTTACCTCAAAGCTGCATTAGCTGAGACGCTGCGTCTTTACCCTTCTGTACCGGAAGACTTCAAATACGTCGTCTCCGACGATGTATTACCGGACGGTACGTTCGTACCGGCTGGTTCGACGGTGACGTATTCGATATATTCAGTGGGTAGGATGAAAACTATATGGGGGGAGGACTGCTTAGAGTTCAAACCGGAAAGGTGGCTGACAGAAGACAACAGCCGGTTCGAGACGCCGAAAGATGGGTATAAGTTTGTAGCTTTTAACGCCGGTCCAAGGACTTGTTTGGGGAAGGACCTTGCTTACCTGCAGATGAAATCTGTGGCGTCGGCCATTCTTCTCCGGTACCGGCTATCCCCAGCTCCTGGTTGCCTCGTGGAGCAGAAGATGTCTCTCACGCTGTTCATGAAAAATGGTCTCCGCATTCTTTTGCAACCCCGTCATCTCGGACCTCCATAG 1572 48.03 SRVLYTLLEMEPLLLFFSVSIVLSTYFLWFYLLSKKLSGPKVWPVIGSLPELFANRERIHEWIANNLRAAAGGSSTYQTCTIAVPFFAFKQGFYTVTCHPKNIEHILRTRFDNYPKGPTWQTAFHDLLGQGIFNSDGETWLMQRKTAALEFTTRTLRLAMARWVNRTIKTRLWCILDKAANENSSVDLQDLLLRLTFDNICGLTFGKDPETLSLNLPENPFALAFDTATEATLQRLLYPGFLWRIEKLLGIGRERMLKKSLNIVENYMNEAIDARKEAPSDDLLSRFLKKRDLSGNLFPVAVLQRIALNFVLAGRDTSSVALSWFFWLVMNHPNVEEKIIKEISTVLKETRGEDKSKWTEDPLVFDEADRLVYLKAALAETLRLYPSVPEDFKYVVSDDVLPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCLEFKPERWLTEDNSRFETPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVASAILLRYRLSPAPGCLVEQKMSLTLFMKNGLRILLQPRHLGPP 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5880231 5881802 + Bma010968.1 Bma14g00540 94521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00540 523 Pfam Cytochrome P450 94 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma14g00540 523 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 13 520 - -
Bma14g00540 523 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma14g00540 523 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma14g00540 523 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma14g00540 523 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma14g00540 523 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma14g00540 523 Gene3D Cytochrome P450 33 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma14g00540 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Bma14g00540 523 PANTHER CYTOCHROME P450 13 520 - -
Bma14g00540 523 SUPERFAMILY Cytochrome P450 28 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma14g00540 523 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma14g00540 523 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma14g00540 523 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma14g00540 523 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00063 Bma-Chr12:1196196 Bma14g00540 Bma-Chr14:5880231 0 dispersed
Bma13g00120 Bma-Chr13:1236337 Bma14g00540 Bma-Chr14:5880231 1.58E-138 dispersed
Bma14g00540 Bma-Chr14:5880231 Bma15g00834 Bma-Chr15:20642555 2.82E-101 dispersed
Bma15g00835 Bma-Chr15:20770812 Bma14g00540 Bma-Chr14:5880231 5.58E-97 dispersed
Bma14g00540 Bma-Chr14:5880231 Bma01g01955 Bma-Chr1:72312069 1.43E-103 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00540 K15401 - jre:108980314 875.159