Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00541 CTAATGGCGACCAAAATGGGATCCATTTTCCACAAGTTTTTCTCCCTCTTAATCTTAATTCTCCATGTTGGTTGCTTTATCTTGACCAACCACACTTCAAACCGCCGTAGCCGCAAACCGAGCTTACCATCCGAATCAAGACAACGCAAGTTCTTCTTCAAACCCCAGAAAGCTTTCTCCTCTTCTTTCTCTTTCCTCAAAAGCATCTTCTCCTCTTCCCAGGCCTGCAAATCAGTAGACCAAACTCCATCCTCCACACCACCTCCATCCTCCCACCAATCCACAGTCTCCTCACGACTGCCCGAGCTTGATGCCTCCGATATTCTGATTAAAAAATCAACCGGGTCTTGCCTGGATTCCGATATCTCGGCCGAGAATCCATTCTCACCCCTCAGAAACGATATCTTCCCCTGCACAGCTTGCGGCGAGATTTTTTCGAAACCTTACCTGCTCGAACAGCATCAAGCTATCAAACATGCTGTTTCGGAGCTTACAGATGGAGATACGGGCAAAAACATAGTCAAAATCATATTCAAAACGGGTTGGCACAGTAATGAAAAGACCCCCAAAATCACTCGGATCCTTAAAGTTCACAACAGCCAAAAGATACTGTCGAGATTCGAAGAGTACAGAGAGACAGTAAAGATCAAGGCAGCACGACACGGCAGCGTTAGGAGGAGAGACGAGAGGTGTATTGCCGATGGAAATGAGCTTCTGAGGTTTCACTGTTCTACTTTCGTGTGCGACTTAGGAGTCAACGGTAGCTCCAGCCTCTGCGGCCAGGAATTTTGCAATATTTGCGAGATAATAAAATCAGGGTTTTCGCCCAAATTGGACGGAATTTCGACGATGTCAAGCAGCTGGAGGGCACACGCGTCGTTGCCGGAGGAGGTGGAGGAGGAGTTCAAGTACATGAACGTGAAGAGGGCGGTGATGGTGTGTCGGGTGGTAGCGGGTCGGGTTGGCTGTGAAGCAGATGAAGCGGAGAAGAAGGATGGAGGGTTTGACTCAGTCGTTGGGAGGAAAGGAAGCGGGACCGACATAAGGTTCGACGAAGAGGAGTTGCTGGTATTTAATCCAAGGGCTGTGCTGCCTTGCTTTGTGATCGTCTACAACGTCTGA 1122 48.75 LMATKMGSIFHKFFSLLILILHVGCFILTNHTSNRRSRKPSLPSESRQRKFFFKPQKAFSSSFSFLKSIFSSSQACKSVDQTPSSTPPPSSHQSTVSSRLPELDASDILIKKSTGSCLDSDISAENPFSPLRNDIFPCTACGEIFSKPYLLEQHQAIKHAVSELTDGDTGKNIVKIIFKTGWHSNEKTPKITRILKVHNSQKILSRFEEYRETVKIKAARHGSVRRRDERCIADGNELLRFHCSTFVCDLGVNGSSSLCGQEFCNICEIIKSGFSPKLDGISTMSSSWRAHASLPEEVEEEFKYMNVKRAVMVCRVVAGRVGCEADEAEKKDGGFDSVVGRKGSGTDIRFDEEELLVFNPRAVLPCFVIVYNV 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5889431 5890552 + Bma010969.1 Bma14g00541 94522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00541 373 ProSitePatterns Zinc finger C2H2 type domain signature. 138 159 IPR013087 -
Bma14g00541 373 ProSiteProfiles Zinc finger C2H2 type domain profile. 136 164 IPR013087 -
Bma14g00541 373 MobiDBLite consensus disorder prediction 79 100 - -
Bma14g00541 373 Gene3D - 161 372 - -
Bma14g00541 373 PANTHER NUCLEIC ACID BINDING PROTEIN 4 372 - -
Bma14g00541 373 SUPERFAMILY ADP-ribosylation 161 372 - -
Bma14g00541 373 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 372 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g01569 Bma14g00541 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00246 Bma-Chr4:2103621 Bma14g00541 Bma-Chr14:5889431 3.11E-63 dispersed
Bma14g00541 Bma-Chr14:5889431 Bma02g00228 Bma-Chr2:2396807 1.26E-65 dispersed
Bma14g00541 Bma-Chr14:5889431 Bma07g01569 Bma-Chr7:51067697 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58321 None None None None Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00541 - - twl:120001712 475.707