Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00567 ATGGAAGAGAGGGAAGGTGGTGTCAGGAGTGGGGTTACAGTGGTAGGATCAGACGCTCCGTCTGACTACCATCTTGCTCCGAGGACGGAGAACTCAGTCCTGACCAGTGGATCAACAGCGACGCCGGCGCAGCCAACTTCTGCTTCAGCTCAGCCTGTGGCGGCACCACCGTCAGCGGGCTTGCCGTTGAAGAAAAAGAGAGGTAGGCCGAGGAAGTACGGACCAGATGGAACAGTCACTATGGCGCTTTCACCGAAGCCGATATCATCATCGGCCCCGCCTCCGGTTATTGACTTCTCCGTGGAGAAGCGGGGAAAGATACGGCCGGCGAACTCAGTGAGCAAAACCAAATACCAAATGGAGAATTTGGGTGAATGGGTTGCTTGCTCCGTTGGTGCTAATTTCACACCCCATATTATTACTGTCAACTCTGGGGAGGATGTCATGATGAAGATTATATCATTTTCCCAACAAGGGCCTCGAGCAATCTGCATTATTTCTGCAAATGGCGTGATCTCTAGCGTCACACTTCGCCAACCTGATTCGTCAGGAGGAACATTAACTTACGAGGGTCGATTTGAAATACTGTCTTTGTCCGGCTCGTTCATGCCGAGTGATAGTGGAGGAACGAGAAGTAGATCGGGTGGAATGAGCGTTTCGTTAGCTAGTCCTGACGGTCGAGTCGTAGGAGGTGGAGTAGCTGGTTTACTTGTAGCTGCTAGTCCTGTCCAAGTTGTAGTAGGGAGTTTCATCTCCGGAAATCAACACGAACAAAAACCCAAGAAGCAAAAATATGACATCACGTCGACTGCACAAGTAACTGCAGAGATTCCAGTTTCGAGCACGGATCCGAAATCTAATGTCTCAGCATCAAATCTGCACGAGGAAAACTGGTCATCTCAGCCGTCTGAGTCGAGAAATAAGCCAACTGATATTAATGTGTCGTTGCCGGGAGGATAA 960 50.1 MEEREGGVRSGVTVVGSDAPSDYHLAPRTENSVLTSGSTATPAQPTSASAQPVAAPPSAGLPLKKKRGRPRKYGPDGTVTMALSPKPISSSAPPPVIDFSVEKRGKIRPANSVSKTKYQMENLGEWVACSVGANFTPHIITVNSGEDVMMKIISFSQQGPRAICIISANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDSGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHEQKPKKQKYDITSTAQVTAEIPVSSTDPKSNVSASNLHEENWSSQPSESRNKPTDINVSLPGG 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6073947 6076543 - Bma010997.1 Bma14g00567 94548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00567 319 CDD DUF296 136 227 IPR005175 -
Bma14g00567 319 MobiDBLite consensus disorder prediction 1 95 - -
Bma14g00567 319 SUPERFAMILY AF0104/ALDC/Ptd012-like 134 256 - -
Bma14g00567 319 MobiDBLite consensus disorder prediction 274 319 - -
Bma14g00567 319 Pfam Plants and Prokaryotes Conserved (PCC) domain 137 250 IPR005175 -
Bma14g00567 319 MobiDBLite consensus disorder prediction 274 312 - -
Bma14g00567 319 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 10 317 IPR039605 GO:0003680
Bma14g00567 319 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 10 317 - -
Bma14g00567 319 Gene3D - 137 275 - -
Bma14g00567 319 ProSiteProfiles PPC domain profile profile. 132 271 IPR005175 -
Bma14g00567 319 MobiDBLite consensus disorder prediction 28 53 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01189 Bma-Chr6:48961601 Bma14g00567 Bma-Chr14:6073947 6.02E-70 dispersed
Bma12g00188 Bma-Chr12:2557149 Bma14g00567 Bma-Chr14:6073947 1.61E-138 dispersed
Bma14g00146 Bma-Chr14:2071090 Bma14g00567 Bma-Chr14:6073947 1.19E-46 dispersed
Bma14g00567 Bma-Chr14:6073947 Bma12g01151 Bma-Chr12:43984444 6.16E-83 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00567 - - qlo:115970025 441.039