Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00573 ATGCACTATGCATACAAGAATGTGATCAGTGGTTTTTCAGCAAGGCTTACGAATGAGGAAGTTAGAGCTATGGAAGAAAAGGATGGCTTTATTTCAGCAATACCCGAGAGGAGAGTGAAGTTACAGACAACTCACACTCCCAGATTCTTGGGGTTGCACCAGAATCTCGGGTTTTGGCCAGAATCGACGTTTGGAAAGGGAACGATCATCGGAGTGCTTGATACTGGAGTTTCACCGGAACATCCTTCATTCAGTGATGAGGGAATTCCACCTCCTCCGGCGAAATGGAAAGGAAAGTGCGAGTTTGACGTATCGAAGTGTAATAACAAACTTATAGGCGCGAGAGCTTTTGATATCTCGGCTAAGGTGGCTGCAGTTCAGAAAGCTGAGCCACCCGTAGATGAAGACGGACATGGAACTCACACAGCCAGCACGGCTGCTGGGAATTTTGTGAAGAATGCTGAAGCGTTGGGGAATGCTGAAGGCACGGCAGTTGGTATGGCGCCTCTTGCTCACCTTGCGATTTACAAGGTCTGTTTCGGCGAAGATTGTTCAGACAGTGACATACTTGCCGGACTTGATGCCGCCATTGAAGATGAGGTCGATGTAATCTCAATGTCCGTGGGCGGACCTTCAGCTCCGTTTTTCAACGACACTATAGCTGTTGGATCATTTGCAGCGATTCAGAAAGGAATATTTGTAAGCTGTTCGGCAGCGAACTTCGGCCCTTTTAACGCCACACTGTCAAATGAAGCTCCATGGATTCTCACAGTCGGAGCGAGCGACATCGATAGAAGAGTCGTAGCTTCCGCAAAGCTCGGAAATGGCGAGGAATACGATGGAGAATCACTTTTCCAGCCAGCTGACTTCCCACCAGCTTTGATTCCTCTTGTTTATGCCGGCGAGAATGGAAATGTAACGTCCTCCTTGTGTGCCGAAGGATCGTTAAACGACGTCGACGTCAGAGGGAAGATAGTTCTATGCGAGAGAGGAGGAGGAATAGCAAGAATTGAGAAAGGGATGGCAGTGAAAAACGCGGGGGGAGCTGCCATGATTTTGATGAACCAAGAACAAGACGGCTTCAGCACCGAAGTCGACGCTCACGTTCTTCCGGCGACTCACATCAGCTTCGCTGCCGGACTTAAGATCAAATCCTACATAAATTCAACTAAACAACCCACTGCAACAATCATATTCAAAGGAACAGTGTTCGGAAATTCTTTGGCCCCGGCTGTTGCTTCTTTCTCTTCAAGAGGTCCCAGCATAGCAAGCCCAGGAATTCTAAAACCCGACATCATCGGACCGGGGGTCAGCATTCTAGCCGCATGGCCGTTCCCTCTCGAAAACCAGACAGATTTCGGCGCAACATTCAACGTGATTTCCGGCACATCCATGTCTTGTCCTCATCTCAGTGGAATCGCAGCCTTGCTCAAGAGTGCGCATCCTTCTTGGTCGCCGGCAGCGATCAAATCTGCAATAATGACTTCAGCCAATCAACTGAACCTTCAAGGGAAACCAATGCTCGATCAGGCTCTCCAACCTGCCGATATTTTTGCCATCGGCGCAGGTCATGTAAACCCATCAAGGGCCAACACTCCGGGACTAATTTACGACATTCAACCTGATGATTACATACCTTACCTCTGTGGTTTGGGCTACAAAGACGACGAAATAACGATCATAGCTCATCGGCCGGTAAAATGCTATGAAGAATCAAGCATACCAGAAGGAGAGCTGAACTACCCTTCATTCTCAGTAGCATTGGGACCATCTCAGACCTTCACGAGGACTGTCACGAACGTAGGCGAGGCCTACTCGTCTTACTCGGTGGAAATCTCGCCGCCGGAAGGAGTTTACACAAGTGTTTCCCCCCAAAAGCTTTATTTCACAGGAGTGAACCAGAAGCTGACATATTCAGTGACTTTCGGACGTATTTATTCAGCTACGACCAAAAATGAATTCTCTCAGGGATATCTGAAATGGGTTTCAGCTAAATATACTGTCAGGAGTCCCATTTCTGTAAGATTTGTCTAA 2034 48.13 MHYAYKNVISGFSARLTNEEVRAMEEKDGFISAIPERRVKLQTTHTPRFLGLHQNLGFWPESTFGKGTIIGVLDTGVSPEHPSFSDEGIPPPPAKWKGKCEFDVSKCNNKLIGARAFDISAKVAAVQKAEPPVDEDGHGTHTASTAAGNFVKNAEALGNAEGTAVGMAPLAHLAIYKVCFGEDCSDSDILAGLDAAIEDEVDVISMSVGGPSAPFFNDTIAVGSFAAIQKGIFVSCSAANFGPFNATLSNEAPWILTVGASDIDRRVVASAKLGNGEEYDGESLFQPADFPPALIPLVYAGENGNVTSSLCAEGSLNDVDVRGKIVLCERGGGIARIEKGMAVKNAGGAAMILMNQEQDGFSTEVDAHVLPATHISFAAGLKIKSYINSTKQPTATIIFKGTVFGNSLAPAVASFSSRGPSIASPGILKPDIIGPGVSILAAWPFPLENQTDFGATFNVISGTSMSCPHLSGIAALLKSAHPSWSPAAIKSAIMTSANQLNLQGKPMLDQALQPADIFAIGAGHVNPSRANTPGLIYDIQPDDYIPYLCGLGYKDDEITIIAHRPVKCYEESSIPEGELNYPSFSVALGPSQTFTRTVTNVGEAYSSYSVEISPPEGVYTSVSPQKLYFTGVNQKLTYSVTFGRIYSATTKNEFSQGYLKWVSAKYTVRSPISVRFV 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6171373 6173406 + Bma011004.1 Bma14g00573 94554

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00573 677 Pfam Subtilase family 65 504 IPR000209 GO:0006508|GO:0008236
Bma14g00573 677 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 3 674 - -
Bma14g00573 677 Gene3D - 548 676 - -
Bma14g00573 677 PRINTS Subtilisin serine protease family (S8) signature 65 84 IPR015500 -
Bma14g00573 677 PRINTS Subtilisin serine protease family (S8) signature 134 147 IPR015500 -
Bma14g00573 677 PRINTS Subtilisin serine protease family (S8) signature 461 477 IPR015500 -
Bma14g00573 677 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 42 IPR037045 -
Bma14g00573 677 Gene3D - 264 405 - -
Bma14g00573 677 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 674 IPR045051 -
Bma14g00573 677 CDD Peptidases_S8_3 39 498 IPR034197 -
Bma14g00573 677 CDD PA_subtilisin_like 272 397 - -
Bma14g00573 677 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 70 81 IPR023827 -
Bma14g00573 677 Pfam PA domain 296 383 IPR003137 -
Bma14g00573 677 Pfam Fibronectin type-III domain 578 674 IPR041469 -
Bma14g00573 677 SUPERFAMILY Subtilisin-like 41 534 IPR036852 GO:0004252|GO:0006508
Bma14g00573 677 Gene3D Peptidase S8/S53 domain 67 544 IPR036852 GO:0004252|GO:0006508
Bma14g00573 677 ProSiteProfiles Serine proteases, subtilase domain profile. 49 531 - -
Bma14g00573 677 SUPERFAMILY PA domain 301 389 IPR046450 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00573 - - - vvi:109121849 1048.11
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01618 Bma-Chr7:51708611 Bma14g00573 Bma-Chr14:6171373 0 dispersed
Bma14g00573 Bma-Chr14:6171373 Bma15g00318 Bma-Chr15:3041672 0 dispersed
Bma14g00573 Bma-Chr14:6171373 Bma06g00357 Bma-Chr6:8683487 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g452 . . . . . . . Bma14g00573 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo19g00290 . . Bpe08g01455 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002315 3 2 1 2 2 2 1 1 3 3 2 2 1 2 2 1 2 3 1 1 2 8 1 0 2 5 1 1 2 3 62
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g00573 Bma_Chr14 FPKM 11.704226 11.682611 9.321394 11.277698 16.629087 8.368101 9.693724 6.892113 5.33211 7.065765