Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00577 ATGCAGGAGCCAGGCTTGGGAATGATGGCATCCGCTGCCGGCGGTGGTGGCTCTAGCTTGAGCGGCGAAGTATCGATCTCCGGCGACCACCATCACCGGAAAATCAAGGTTGAGATAGCCGCTCACCCTATATACGAGCAGCTTCTCGCCGCCCACGTGGCTTGTCTTCGTGTAGCTACCCCTATTGATCAGTTGCCGCTCATAGACGCGCAGCTGGCTCAATCGGAACATCTTTTACGCTCTTATGCGGCGCAGTCTCAACATCAGCAAGGCCATTCTCTCTCTCCCCATGAGAGCCAAGAGCTTGACAACTGCTTGGCACAGTATCTCTTAGTTTTGTGCTCCTTTAAAGAACAACTTCAACAACATATTAGAGTTCATGCTGTAGAAGCCGTCATGGCCTGCCGCGAAATTGAAAACACTTTACAAGCTCTCACTGGAGCTAGTCTGGGAGAAGGCACAGGAGCAACAATGTCAGACGATGAAGAAGATATGCAGATGGATTTCTCGTTGGACCCATCTGGTGCAGATGGCCATGACATGATGGGTTTTGGTTTCAAATCTAGAATTGAAGACGTCAGAGAAGAGATACTGAGAAAAAGAAGGGCCGGAAAATTACCTGGGGATACAACGACTGTGCTGAAAAATTGGTGGCAACAGCATTCTAAGTGGCCTTATCCAACAGAAGATGACAAAGCAAAGCTAGTGGAGGAGACAGGGCTGCAGCTGAAGCAAATAAACAACTGGTTCATCAACCAAAGAAAAAGGAACTGGCACAGCAATTCTCAGTCTGTAACATCCTTGAAGTCCAAGCGCAAGAGATAG 825 48.73 MQEPGLGMMASAAGGGGSSLSGEVSISGDHHHRKIKVEIAAHPIYEQLLAAHVACLRVATPIDQLPLIDAQLAQSEHLLRSYAAQSQHQQGHSLSPHESQELDNCLAQYLLVLCSFKEQLQQHIRVHAVEAVMACREIENTLQALTGASLGEGTGATMSDDEEDMQMDFSLDPSGADGHDMMGFGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6216736 6219355 + Bma011012.1 Bma14g00577 94558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00577 274 ProSiteProfiles 'Homeobox' domain profile. 197 260 IPR001356 GO:0003677
Bma14g00577 274 SUPERFAMILY Homeodomain-like 199 264 IPR009057 -
Bma14g00577 274 CDD homeodomain 200 261 IPR001356 GO:0003677
Bma14g00577 274 Gene3D - 196 270 - -
Bma14g00577 274 Pfam KNOX2 domain 96 146 IPR005541 GO:0003677|GO:0005634
Bma14g00577 274 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 7 2 185 - -
Bma14g00577 274 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 7 185 274 - -
Bma14g00577 274 Pfam Homeobox KN domain 217 256 IPR008422 GO:0003677|GO:0006355
Bma14g00577 274 SMART KNOX1_2 33 77 IPR005540 GO:0003677|GO:0005634
Bma14g00577 274 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 185 274 - -
Bma14g00577 274 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 2 185 - -
Bma14g00577 274 SMART KNOX2_2 92 147 IPR005541 GO:0003677|GO:0005634
Bma14g00577 274 MobiDBLite consensus disorder prediction 1 26 - -
Bma14g00577 274 Pfam KNOX1 domain 35 76 IPR005540 GO:0003677|GO:0005634
Bma14g00577 274 SMART HOX_1 199 264 IPR001356 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g01627 Bma14g00577 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00080 Bma-Chr4:660429 Bma14g00577 Bma-Chr14:6216736 2.01E-103 dispersed
Bma14g00577 Bma-Chr14:6216736 Bma14g01797 Bma-Chr14:38552455 3.19E-29 dispersed
Bma14g00577 Bma-Chr14:6216736 Bma07g01627 Bma-Chr7:51860220 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58323 PF03791 KNOX2 8.60E-16 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00577 - - tcc:18606426 451.44