Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma14g00577 | ATGCAGGAGCCAGGCTTGGGAATGATGGCATCCGCTGCCGGCGGTGGTGGCTCTAGCTTGAGCGGCGAAGTATCGATCTCCGGCGACCACCATCACCGGAAAATCAAGGTTGAGATAGCCGCTCACCCTATATACGAGCAGCTTCTCGCCGCCCACGTGGCTTGTCTTCGTGTAGCTACCCCTATTGATCAGTTGCCGCTCATAGACGCGCAGCTGGCTCAATCGGAACATCTTTTACGCTCTTATGCGGCGCAGTCTCAACATCAGCAAGGCCATTCTCTCTCTCCCCATGAGAGCCAAGAGCTTGACAACTGCTTGGCACAGTATCTCTTAGTTTTGTGCTCCTTTAAAGAACAACTTCAACAACATATTAGAGTTCATGCTGTAGAAGCCGTCATGGCCTGCCGCGAAATTGAAAACACTTTACAAGCTCTCACTGGAGCTAGTCTGGGAGAAGGCACAGGAGCAACAATGTCAGACGATGAAGAAGATATGCAGATGGATTTCTCGTTGGACCCATCTGGTGCAGATGGCCATGACATGATGGGTTTTGGTTTCAAATCTAGAATTGAAGACGTCAGAGAAGAGATACTGAGAAAAAGAAGGGCCGGAAAATTACCTGGGGATACAACGACTGTGCTGAAAAATTGGTGGCAACAGCATTCTAAGTGGCCTTATCCAACAGAAGATGACAAAGCAAAGCTAGTGGAGGAGACAGGGCTGCAGCTGAAGCAAATAAACAACTGGTTCATCAACCAAAGAAAAAGGAACTGGCACAGCAATTCTCAGTCTGTAACATCCTTGAAGTCCAAGCGCAAGAGATAG | 825 | 48.73 | MQEPGLGMMASAAGGGGSSLSGEVSISGDHHHRKIKVEIAAHPIYEQLLAAHVACLRVATPIDQLPLIDAQLAQSEHLLRSYAAQSQHQQGHSLSPHESQELDNCLAQYLLVLCSFKEQLQQHIRVHAVEAVMACREIENTLQALTGASLGEGTGATMSDDEEDMQMDFSLDPSGADGHDMMGFGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR | 274 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 6216736 | 6219355 | + | Bma011012.1 | Bma14g00577 | 94558 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma14g00577 | 274 | ProSiteProfiles | 'Homeobox' domain profile. | 197 | 260 | IPR001356 | GO:0003677 | |
Bma14g00577 | 274 | SUPERFAMILY | Homeodomain-like | 199 | 264 | IPR009057 | - | |
Bma14g00577 | 274 | CDD | homeodomain | 200 | 261 | IPR001356 | GO:0003677 | |
Bma14g00577 | 274 | Gene3D | - | 196 | 270 | - | - | |
Bma14g00577 | 274 | Pfam | KNOX2 domain | 96 | 146 | IPR005541 | GO:0003677|GO:0005634 | |
Bma14g00577 | 274 | PANTHER | HOMEOBOX PROTEIN KNOTTED-1-LIKE 7 | 2 | 185 | - | - | |
Bma14g00577 | 274 | PANTHER | HOMEOBOX PROTEIN KNOTTED-1-LIKE 7 | 185 | 274 | - | - | |
Bma14g00577 | 274 | Pfam | Homeobox KN domain | 217 | 256 | IPR008422 | GO:0003677|GO:0006355 | |
Bma14g00577 | 274 | SMART | KNOX1_2 | 33 | 77 | IPR005540 | GO:0003677|GO:0005634 | |
Bma14g00577 | 274 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 185 | 274 | - | - | |
Bma14g00577 | 274 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 2 | 185 | - | - | |
Bma14g00577 | 274 | SMART | KNOX2_2 | 92 | 147 | IPR005541 | GO:0003677|GO:0005634 | |
Bma14g00577 | 274 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Bma14g00577 | 274 | Pfam | KNOX1 domain | 35 | 76 | IPR005540 | GO:0003677|GO:0005634 | |
Bma14g00577 | 274 | SMART | HOX_1 | 199 | 264 | IPR001356 | GO:0003677 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma07g01627 | Bma14g00577 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g00080 | Bma-Chr4:660429 | Bma14g00577 | Bma-Chr14:6216736 | 2.01E-103 | dispersed | |
Bma14g00577 | Bma-Chr14:6216736 | Bma14g01797 | Bma-Chr14:38552455 | 3.19E-29 | dispersed | |
Bma14g00577 | Bma-Chr14:6216736 | Bma07g01627 | Bma-Chr7:51860220 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
58323 | PF03791 | KNOX2 | 8.60E-16 | No_clan | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma14g00577 | - | - | tcc:18606426 | 451.44 |