Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00583 ATGTTGGCTGGGTGTACTAGTTCAACATTACTGTCGCCGAGGCATAGATTGAAGAGCGAAGCAGCAGCGCAGTTTCAAGCTTGCCATTTCCAGTTACCTTCGATGAACACGCAGAGATTGGATTTACCATGTACCAGTTTTTCTCGCAAAGAGATCTCACGCTCGCAGCCGATTAGGCCAGCTGGGCTTTCGGTGGAGAAGACGAATGATTCAAAAGCTACCAGTTGCTCTCTCAAACAGATTAGATTACCTCTAACTGCGACAAGCCTTCAGACGCCATTTTCAGAGGTTCGGAGAGAGATTGGCAGCGAGTATTGGGAGAAAGGGAAGAACTTGAAGAGGTTAGCCGAAGAAGAAGTCTGTGCAGACATAGCAAAGAGGAAAAGAAGTGGAAGCTGCAAAAATGGAGAATGTATCCGTCATTTGACAATTGAAAAATTTGGCGGCGCTGACTTTTTTTGGTTTCAGCCAGGTTTCCCTCAAGAAGTTTGCTTTGTTCCGAGCGAAGTGATTTCATCACCCCCGGTAGAAAGTGGGGTGAACAAGATAACTGAATTCGGAGAGAAAGAAGGAGGCTCAGCCGTTCCTGAGAAAGACGTGTCAGATTCGAGTGGTTCGTCGGAAAATCAAAGCTTTGTCCTTCTGATCAACGACAACGCTGCAGAAGAAGTTGGAAATGGGTCTAGAAATCCACATTTACTTCCTGGGTTTGAATCAGAAACTGGAACTGCAGAAAATCGAGGAGAGCGAGAAGGGTTTGAGCTCGTCAGCTTGCTGACGGCCTGCGTCGAAGCGATTCGATCGAAGAACATCGCATTGATCAACCATCTTATCGACAGATTAGGAGATCTTGCTTCTCCTCGAGGATCTTCGATGAGCCGTCTGGTGTCTTACTATACTGAAGCCTTGGCTCTGCGAGTGGCAAGACTATGGCCGCACATATTTCACATATCAACTCCCGGAGATTTCGATCGCGCCGATGACAATTCCGGCGCTGCATTAAGGCTTCTAAACCAGGTGAGCCCAATCCCAAAGTTCATCCATTTCACGTCAAATGAGGTATTCTTAAGAGCTTTTGAAGGGAAAGACAGAGTTCACATCATAGATTTCGAGATAAAGCAAGGCCTTCAATGGCCGAGCTTGTTTCAAAGTTTAGCTTCGAGAACAAATCCACCTACCCATGTTAGGATCACCGGCGTAGGAGAATTGAAGCAGGAATTGAACGAGACAGGCTACCGGCTTTCCGGATTTGCTGAGGCGTTGAATCTGCCATTCGAGTTCCACCCAGTCGTCGACCGGCTAGAAGATGTCCGGCTGTGGATGCTTCACGTGAAGGACCAAGAATGTGTAGCCGTGAATTGTGTTTTCCAGCTTCATAAACTGCTCCACGACCGCCATGGAAGTGCAATAAGAGACTTTCTAGCCCTCATCAGAAGCACAAATCCTTCAACTGTCGTCATTGCAGAGCAAGAATCCGATCACAACGACCCGAATTTAGAGATGAGAGTTTTCAACACCTTGAAATACTACTCCGCCATTTTCGACTCCTTCGATTCGATATTTCCTCTCAACAACCCCGTCCGAATCAAAATAGAAGAGATGTTTGCAATGGAAATTCGGAACATCATCGCTTGTGAGGGAATCGAGAGATTCGAGAGGCACGAGAGCTTCGAGAAATGGAGAAAAACTATGGAGGATAACGGGTTTAAGTGCGTCCGGATTTCTGATCGAGAAATGATTCAGAGCCGAATTCTGCTGAAGATGTATGCTTGTGATAGTTATAATGTGAGCAAGCCAACTGGAGATGAAGCATTGACTCTAAACTGGGAGGAGCAGTCCCTCTACACTGTGTCAGCATGGACGCCATTGCCATTGCCATCAGAGATTGGAGGCAGCTCATCTTCTTTTTCTCAGTCTTGA 1920 46.67 MLAGCTSSTLLSPRHRLKSEAAAQFQACHFQLPSMNTQRLDLPCTSFSRKEISRSQPIRPAGLSVEKTNDSKATSCSLKQIRLPLTATSLQTPFSEVRREIGSEYWEKGKNLKRLAEEEVCADIAKRKRSGSCKNGECIRHLTIEKFGGADFFWFQPGFPQEVCFVPSEVISSPPVESGVNKITEFGEKEGGSAVPEKDVSDSSGSSENQSFVLLINDNAAEEVGNGSRNPHLLPGFESETGTAENRGEREGFELVSLLTACVEAIRSKNIALINHLIDRLGDLASPRGSSMSRLVSYYTEALALRVARLWPHIFHISTPGDFDRADDNSGAALRLLNQVSPIPKFIHFTSNEVFLRAFEGKDRVHIIDFEIKQGLQWPSLFQSLASRTNPPTHVRITGVGELKQELNETGYRLSGFAEALNLPFEFHPVVDRLEDVRLWMLHVKDQECVAVNCVFQLHKLLHDRHGSAIRDFLALIRSTNPSTVVIAEQESDHNDPNLEMRVFNTLKYYSAIFDSFDSIFPLNNPVRIKIEEMFAMEIRNIIACEGIERFERHESFEKWRKTMEDNGFKCVRISDREMIQSRILLKMYACDSYNVSKPTGDEALTLNWEEQSLYTVSAWTPLPLPSEIGGSSSSFSQS 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6329094 6331013 - Bma011019.1 Bma14g00583 94564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00583 639 PANTHER SCARECROW-LIKE PROTEIN 28 6 625 IPR030027 -
Bma14g00583 639 MobiDBLite consensus disorder prediction 225 248 - -
Bma14g00583 639 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 625 IPR005202 -
Bma14g00583 639 Pfam GRAS domain family 255 621 IPR005202 -
Bma14g00583 639 ProSiteProfiles GRAS family profile. 246 621 IPR005202 -
Bma14g00583 639 MobiDBLite consensus disorder prediction 187 207 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g00583 Bma-Chr14:6329094 Bma14g01407 Bma-Chr14:26610798 2.48E-93 dispersed
Bma01g00827 Bma-Chr1:7783135 Bma14g00583 Bma-Chr14:6329094 7.61E-48 transposed
Bma09g00766 Bma-Chr9:46189977 Bma14g00583 Bma-Chr14:6329094 1.67E-68 transposed
Bma14g00583 Bma-Chr14:6329094 Bma07g01634 Bma-Chr7:51948785 6.14E-43 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58325 PF03514 GRAS 4.40E-126 CL0063 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00583 - - jre:108984412 794.267