Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00602 ATGGCCAGAGAACTCTGCGAAGACAAATCAAGAAACATGGTTTCTTCCACAGGGTTTTGCTACTCGTCGGAGGTTTCTTCCGGCGACCCGAGTTTCCAAAACCATTTCGTAAGCCAGATCCAAGAGTTCGAGCCGAATCCAGCTGAGATCTTCAGCTTGACGACCAACATGGAGATGGTAGGGTTTTCAAAGAATCTCCATCATCAAAGCGGAAGTAACTCAGTTTTATGGAAAGAAGTTTCTACAAAGCCTAACATGGGGTCGTCGTCTTCAAAAACGATGAACGAATCATCCAGTTTCTACGACCATGATTTCAACAAGCAAGATTTTACCAGCACCAGCGAGAATCTAATGGCTGGAGTTGGACCAGTAACGGGAGCTTGGCAAGAGAATAGATTCTGTATAGATGATTCTTCCTTGAGGTGCGTTTTTAATTATGGAGCAAACGAAAGGCCTATCCACGGCCTTTCTCTTTCTCTTTCTTCAGATAACCCTTCCGGTATCGGCTTACAGTCTTTTGAACTGAGACAAACCGGAGAAGCTGTTGAGAAACTTGTTTCTTCTGTTTCTAGGAATAATGGGTTCTTCGGAAAAGCCGATAATATTCAACAGCAACAACAGATTTTGCGAGATGGGTTGGTCGGAAAAGTTGCAGATCTTCATCACAATGGCGACTTTCAGCTTGGAAACTCCAAGTTTTTGATTCCAACGCAGCAGCTTTTGAATGAATTCTGCAGCCTTGGAGAGAGAATTAATGATGCAGCGAAGAAGAAGAGTCATAAAACCACGCAGTGGGTAGAAGAAAATGCTACTACTTCTTTGAGGAAGCAGTCTCTTCACTCCCTTGATTTTATTGAATTGCAGAAGAGAAAAACGAGGCTATTTTCAACGATGGAAGAGCTCGAGCGTAGATACAGGCACTACTGCGACCAAATGAAAATGGTGGTGTCTTCATTCGAAGCGGTGGCTGGCGACGGAGCTGCGAATGTGTATTCCGCTTTAGCCTGCACGGCTATGTCAAGGCATTTCAGGTGTTTGAAAGATGGGATAGTGGTGCAGATTCAGGCAGTGAAGAAGGCGATGGGAGAGAAAGATCAGCAGGCGGCAGCGCCGGGGGCTTCGAAGGGGGAAACGCCGAGGCTTCGCATTCTTGATCAGACGCTAAGACAGCAAAGGGCTTTCCAGCAAATGAGCTTGATGGAGAGCCACCCATGGCGGCCACAGCGTGGCCTTCCTGAACGTTCCGTTTCTGTTCTCCGAGCTTGGCTGTTTGAACACTTTCTTCACCCGTACCCAAGCGATGTTGATAAACACATCTTAGCCCGCCAAACTGGTCTCTCAAGAAGCCAGATTTCCAACTGGTTCATCAATGCAAGGGTGAGGCTGTGGAAGCCAATGGTGGAGGATATGTATTTGGAAGAACAAAAGGAGCAAGAAAACACATTGAACTCCTCCGCCGGAGGCATCGACATGGACAATAACAGAAGAACGAGGCCGGAAGATCGAAAACCGACGGCCGACCAACTACTCAAAATGAACTCCGAGTGCCTCTCATCCATCATTAACAACCCACCAAACTCAAAACCCGCCAAACCCATGCATAACCCCCTCCACCAACAGCGAAATTTCTGCTCATTCGGGGCAATGGAGCTCGACTTCTCTTCCTACAATCATCAGTCTGCCGGAGCTGCACAAAGTTTTAACGGAGGCAGCGGAGGAGGTGTCTCATTGACACTAGGGCTACAACATCATGGTGGTAATGGACCGGTGAGCCTGGCATTCTCTCCCTCACCTCAAACTAATTCTCTCTTCTACCCTAGAGATTCCATTGAAGAATGTCAACCATCTATTCACTACTCCTTTTTAGATGCAGAAGCTCATAATTTGCCTTACAGAAATTTAATGGGGGCTCAGCTGCTCCACGATTTGGCTGGATAA 1938 46.96 MARELCEDKSRNMVSSTGFCYSSEVSSGDPSFQNHFVSQIQEFEPNPAEIFSLTTNMEMVGFSKNLHHQSGSNSVLWKEVSTKPNMGSSSSKTMNESSSFYDHDFNKQDFTSTSENLMAGVGPVTGAWQENRFCIDDSSLRCVFNYGANERPIHGLSLSLSSDNPSGIGLQSFELRQTGEAVEKLVSSVSRNNGFFGKADNIQQQQQILRDGLVGKVADLHHNGDFQLGNSKFLIPTQQLLNEFCSLGERINDAAKKKSHKTTQWVEENATTSLRKQSLHSLDFIELQKRKTRLFSTMEELERRYRHYCDQMKMVVSSFEAVAGDGAANVYSALACTAMSRHFRCLKDGIVVQIQAVKKAMGEKDQQAAAPGASKGETPRLRILDQTLRQQRAFQQMSLMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQISNWFINARVRLWKPMVEDMYLEEQKEQENTLNSSAGGIDMDNNRRTRPEDRKPTADQLLKMNSECLSSIINNPPNSKPAKPMHNPLHQQRNFCSFGAMELDFSSYNHQSAGAAQSFNGGSGGGVSLTLGLQHHGGNGPVSLAFSPSPQTNSLFYPRDSIEECQPSIHYSFLDAEAHNLPYRNLMGAQLLHDLAG 645
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6539299 6542135 - Bma011040.1 Bma14g00602 94583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00602 645 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 1 599 - -
Bma14g00602 645 MobiDBLite consensus disorder prediction 478 504 - -
Bma14g00602 645 Pfam Homeobox KN domain 422 461 IPR008422 GO:0003677|GO:0006355
Bma14g00602 645 Gene3D - 408 470 - -
Bma14g00602 645 ProSiteProfiles 'Homeobox' domain profile. 402 465 IPR001356 GO:0003677
Bma14g00602 645 CDD homeodomain 405 466 IPR001356 GO:0003677
Bma14g00602 645 Pfam Associated with HOX 228 350 IPR006563 -
Bma14g00602 645 SUPERFAMILY Homeodomain-like 406 471 IPR009057 -
Bma14g00602 645 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 599 - -
Bma14g00602 645 Coils Coil 284 304 - -
Bma14g00602 645 SMART prehox3 222 352 IPR006563 -
Bma14g00602 645 SMART HOX_1 405 469 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00527 Bma-Chr4:4641565 Bma14g00602 Bma-Chr14:6539299 3.44E-84 dispersed
Bma04g01538 Bma-Chr4:51436269 Bma14g00602 Bma-Chr14:6539299 3.24E-82 dispersed
Bma10g00129 Bma-Chr10:1167298 Bma14g00602 Bma-Chr14:6539299 8.98E-80 dispersed
Bma03g01078 Bma-Chr3:13387749 Bma14g00602 Bma-Chr14:6539299 3.56E-70 transposed
Bma09g00348 Bma-Chr9:30200720 Bma14g00602 Bma-Chr14:6539299 2.09E-79 transposed
Bma14g00602 Bma-Chr14:6539299 Bma07g01658 Bma-Chr7:52164392 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58327 PF07526 POX 1.70E-40 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00602 - - tcc:18606572 825.469