Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00604 ATGGGGTTTCCAGTTGGCTACACGGAGCTTCTTCTTCCTAACCTCTTCCTCCATACTCTTTCCCTTCTGGGTTTTCTAAGGAAGTTTCTTTCCACTCTCTTTCGCTTCCTCGGCCTCCGCGACTTCCTCGAACCTGACATTTCCTTCTCGCAACCCGACCGCATCGTCCACGACTCCGATTCCATATATTCCGTTCTGATCCGAGAGTTTCTTCCCGTCTCGAAGTTCTCCGACCTTGTTCACCCGCCGGAGAGCTGCGCAGTTTGTCTTTACGAGTTCGAGGCCGATGACGAGATCCGGCGCCTCACAAATTGCCGTCACATATTCCATAAAACTTGTCTCGATCGATGGATGTGTTACTACCAGAAGACGTGTCCGCTCTGTCGAACGCCATTCATTCCGCCGGATTTTCTCTGCGGTTCCGATGAACAGCCGTCTGAAATCGCCGAATCGTACGGCGATTCTTAG 468 51.92 MGFPVGYTELLLPNLFLHTLSLLGFLRKFLSTLFRFLGLRDFLEPDISFSQPDRIVHDSDSIYSVLIREFLPVSKFSDLVHPPESCAVCLYEFEADDEIRRLTNCRHIFHKTCLDRWMCYYQKTCPLCRTPFIPPDFLCGSDEQPSEIAESYGDS 155
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6570856 6571323 + Bma011043.1 Bma14g00604 94585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00604 155 SUPERFAMILY RING/U-box 64 135 - -
Bma14g00604 155 ProSiteProfiles Zinc finger RING-type profile. 86 129 IPR001841 -
Bma14g00604 155 Pfam Ring finger domain 85 129 IPR001841 -
Bma14g00604 155 PANTHER BRH1 RING FINGER PROTEIN 1 136 - -
Bma14g00604 155 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 134 IPR013083 -
Bma14g00604 155 CDD RING-H2 86 129 - -
Bma14g00604 155 SMART ring_2 86 128 IPR001841 -
Bma14g00604 155 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 136 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00881 Bma-Chr4:11591658 Bma14g00604 Bma-Chr14:6570856 3.10E-52 dispersed
Bma05g00824 Bma-Chr5:45587291 Bma14g00604 Bma-Chr14:6570856 3.04E-55 dispersed
Bma05g01183 Bma-Chr5:50957905 Bma14g00604 Bma-Chr14:6570856 2.59E-61 dispersed
Bma09g00051 Bma-Chr9:1190164 Bma14g00604 Bma-Chr14:6570856 3.10E-17 dispersed
Bma14g00604 Bma-Chr14:6570856 Bma07g01660 Bma-Chr7:52185047 2.46E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00604 K16281 - jre:109014495 222.631