Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00656 ATGGATTCGGATAATGAGTTTTCGGCACTAGAGTCTGTCGAGGATAGCGAAGCGATCTCCCCAAAGATGATAGTCCAAAGGGATGATAATGGAATGTTGAATAATGGATCTTATGCCAATGACAGTGAGGTTTCTGTCGGAAATGTTCATGATCGTGAAATATTGCTGGAAGATACCAAAGGAGAAGATGATGGGACTGGCAATTTGCGTTCTCCCACTCTTTCTGCCACACCTGATGGGGGTTCACCTTCTAATCGGAAAGGAGTAGGGTTAAAGAAATGGAGACGAATTAGGAGGGATCATGTTAAGGATGCAAACCCCTTTGCAGATTCTAGTAAAATGTTGAAGCGTGGTTTGGCCACTTCTACTAACAATCAGTCTAAACCTCAATTTTCTTCTCCAGACATGAAGCAACAGAGCGAAGGTTCCGTTGGATCTGAAAATACGCATAGGAATTTTGGAATTCCCCATAGCTTGGCAGTCCCAATTTCAATACCAGATTCTAGGTTTGCAGTTGGGTCTGGAATTGCTGGCGATTCTGACAGTGAGGACAGGGGCAGCAAGTTCTCCACAGCAGCTAGTGGTCCAAAGACGAGGCAGCCAAGGCCTGTGCGAGAAAAGAGCAGGATAAACACGGCTGCGAGAAGTTCGGGTTCTTCGGTTCTGCAGTTCCAGCCAGGAAAGGGGCATAGTGAAGGCAGTAAAAAGCTTAGAGGGGAAAAGGTTAAAATTGAAGAGGAAAACTCTCTCTCCAGCTTAGAGTCTGACTCAGTAAACTCTAACTTTGTCTTTGCCCATGGTTCTTTTACGGCCAGTGATAATGGAAAACAAGGTGAAAGAGCTGGGAATTATGGCGGAGAGAATGTTGATGGAGCTCATAAATTAGAAAAACAGTACACTGAGGAAGCTGATAGAGGAAATGGGAAAGTGGTTGATGGAGAAAATGATGGTGCTGCAGAAAAAAATCCAGAGTCAAGAGATCAAGATTGTCTTGCAGATTCTATGTTGAGCCTCCAATCTGTGCAGGAAGCTCTTGGAAGAGAAGTTAATTATGTGTTTACTTTTGCAGAAGTTGAGAAATTGGGCACAATTGGTAGGGAGGCTACTCAAAGACAGAGTAGCTTAGGAACACAAGTAGTACAGATGAAAGTTTTGGAGAGAAAATTGGAGGAGACTACGGCCATGCTCGAAGCGAAGGAGCTTCGTATTACTGAACTCCAGGCGGAGATTAGTCATAGTAACGGCGATGGCGAGGTGGAAGACATTTTGAAGCTAAAGATGGAAGCAGAAGTAGAATATTTGGTATTGACAAGAACAATGCAGACGATGAAAGATGCCCTTAGTGGTCCGGCGAAACTTGTGGAAGAACAGAAGGCTTTGGTGGAGGAGCAAGTGGGCATGATACACAAGCTCGGAGAAACGGAAAGCAAAGCGAAAATGCTGGAGGAGAAAATGAAACAGCTGGAGCTGGAGAAAAATGAAGATGTTGAGAAGATGCAAAGCAGAGTTTGTAAGGTGACTTTCTGTTTTCTCACTGAGTTGCTACTTTTGCTCTTAGTGTTGTGGGCTTTTGTGTTGGAGTTGTTGCCTGAGCCTGAGGTGACTGTACCCACATAG 1617 44.47 MDSDNEFSALESVEDSEAISPKMIVQRDDNGMLNNGSYANDSEVSVGNVHDREILLEDTKGEDDGTGNLRSPTLSATPDGGSPSNRKGVGLKKWRRIRRDHVKDANPFADSSKMLKRGLATSTNNQSKPQFSSPDMKQQSEGSVGSENTHRNFGIPHSLAVPISIPDSRFAVGSGIAGDSDSEDRGSKFSTAASGPKTRQPRPVREKSRINTAARSSGSSVLQFQPGKGHSEGSKKLRGEKVKIEEENSLSSLESDSVNSNFVFAHGSFTASDNGKQGERAGNYGGENVDGAHKLEKQYTEEADRGNGKVVDGENDGAAEKNPESRDQDCLADSMLSLQSVQEALGREVNYVFTFAEVEKLGTIGREATQRQSSLGTQVVQMKVLERKLEETTAMLEAKELRITELQAEISHSNGDGEVEDILKLKMEAEVEYLVLTRTMQTMKDALSGPAKLVEEQKALVEEQVGMIHKLGETESKAKMLEEKMKQLELEKNEDVEKMQSRVCKVTFCFLTELLLLLLVLWAFVLELLPEPEVTVPT 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7091062 7094556 + Bma011102.1 Bma14g00656 94637

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00656 538 Coils Coil 471 498 - -
Bma14g00656 538 Coils Coil 382 409 - -
Bma14g00656 538 MobiDBLite consensus disorder prediction 290 328 - -
Bma14g00656 538 MobiDBLite consensus disorder prediction 169 255 - -
Bma14g00656 538 PANTHER WPP DOMAIN-INTERACTING PROTEIN 2 35 538 - -
Bma14g00656 538 PANTHER WPP DOMAIN-INTERACTING PROTEIN 2 35 538 IPR044696 -
Bma14g00656 538 MobiDBLite consensus disorder prediction 231 250 - -
Bma14g00656 538 MobiDBLite consensus disorder prediction 66 82 - -
Bma14g00656 538 MobiDBLite consensus disorder prediction 116 153 - -
Bma14g00656 538 MobiDBLite consensus disorder prediction 1 155 - -
Bma14g00656 538 MobiDBLite consensus disorder prediction 30 44 - -
Bma14g00656 538 MobiDBLite consensus disorder prediction 268 328 - -
Bma14g00656 538 MobiDBLite consensus disorder prediction 46 65 - -
Bma14g00656 538 MobiDBLite consensus disorder prediction 210 227 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00656 - - - vvi:100251593 346.665
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bma07g01232 Bma14g00656 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01258 Bma-Chr7:47706871 Bma14g00656 Bma-Chr14:7091062 0 dispersed
Bma14g00656 Bma-Chr14:7091062 Bma07g01232 Bma-Chr7:47232095 1.57E-174 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g787 Blo03g00479 Blo03g01494 Bda07g00438 Bda09g00453 . Bpe08g01074 . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone14ag1273 Cone15ag1299 . Csa03g00380 . . . . . . Bpe11g00614 . Bma07g01232 Bma14g00656 . . . . Cma16g00998 . Car16g00955 Cpe14g00821 . . . . . . . . . . . . . . . . . Chy06g01934 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004840 2 1 2 3 2 1 2 1 1 1 2 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 0 2 1 1 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g00656 Bma_Chr14 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0