Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00662 ATGAGTTCGGTTGATGATGAATCGACCAACGCCCTTGAGGAAGAGAGTCTGTTTCGGCCGGAGACTCGACCCAGGCAGATCCCTAATGGCAATGCAGTTGAAAATGGACCATTTGCGGGCGATTCCCGAGCGATGGGTTATAAACGACTTAATATTGCTGTATATAAGAGCGTAAAGACTGTTGTTTTCTCAAATAAACTAAACTTCCTTATCCCTTTCGGCCCCCTTGCAATCCTTGTTGACAAATTAACTGGTCATCATGGCTGGGTGTTCTTTTTTAGCTTGTTAGGTATAGTGCCTCTGGCTGAGCGTCTGGGTTATTCTACAGAGCAGCTGGTCTTTTATACGGGCGCTACTGTTGGGGGGCTCTTAAATGCTAGCTTCGGAAATGCAACAGAACTGATTATATCTATTTACGCTCTCAAGAGTGGAATGATTCGCGTTGTGCAGCTATCTTTACTTGGCTCGATTCTTTCCAATATGTTGTTAGTGCTTGGATGTGCATTCTTCTGTGGCGGACTCGTTCATCGTAAAAAGGAACAGACTTTTAGCAAGTCAACTGCGGTTGTCAACTCGGGATTGCTTTTAATGGCAGTCATGGGCCTTCTCTTTCCTGCAGTTCTGTATTACACCCACAGTGAGGCTCATTTTGGGACCTCCGAGTTGGCTCTCTCTAGATTTACCAGCTGCATTATGCTCGTCGTCTATGCTGCATATCTTTTCTTCCAGTTAAAGAGTCAAGAAAAACTGTATGCTTCTCCAGCTGAGGATGGGAATCAGAATTGTATGGATGCGGGAGACGATGATGAGGCCGCAGAGATCTCTAAATTGGAGTCGATTATCTGGCTTTTCATCATGACTGCTTGGATTTCTATTCTATCCGAGTATTTAGTTCATGCCATAGAGGGGGCATCAATATCATTCGGAATTCCAATCACATTTATTAGTGTTATTTTGCTGCCAATTGTGGGAAATGCAGCTGAGCATGCTAGTGCAATCTTGTTTGCTATGAAAGACAAGCTCGTAAGACTTCCAACCCAACATTTATTCTCTGCTGTTACTATGAACTGCAATAATTTCTGGGTATCTATGCAGGATATATCATTAGGAGTGGCGATTGGCTCATCAACGCAGATTTCTATGTTCGGAATGAAATCACCCATGCTTTACTGTATCCTGCAGGTTCCATTCTCAGTAGTGATTGGGTGGATGATGGGACAACCCATGGACTTAAACTTCAAACTTTTCGAGACGGCTACTCTTTTCATAACCGTGATAGTGGTTGCCTTCTTGCTACAGGATACTCTGAGGTCTCCTCCACCAGAAAACCAAACAATGAAGACAGCCTCTGCTGTCGCCATCTTCGTCACCACCGTCTTCTACCTCTGCTTTGGTTGCTTCGGATATGCAGCATTTGGTAGCGATACGCCTGGCAATCTCTTGACTGGATTTGGATTCTACGAACCCTTTTGGCTCGTCGATTTTGCCAATGCCTGCATTGTCGTCAATATGTTGGGAGGATATCAGATGTACAGCCAGCCGGTGTTTGGGGCAGCCCAAAGATGGTTTTCTGCCAAGTTTCCGAGCAGTGATTATGTGAACAGGTTTTATAGCATTAAGCTCCCATGGTTGCCAGGTTTTCAATTAAATTTTTTCCGGCTTACTTTCCGAACCGCATATGTAGTCTCAACAACTGCATTGGCCATACTCTTCCCATATTTCAACGAAGTTCTAGGAGTGCTTGGGGCGTTGAATTTCTGGCCATTGGCCATATATTTCCCTGTCCAGATGTATTTTGTACAGAAGAAAATTAGACCCTGGACAAGGCCATGGTTTGTTCTTGGAGCATTTTGCCTTTTCGGCTTCCTGGTGTCTGTCATGGGCCTCATTGGATCAATGGAAGGCCTCATCAATGCCAAACTTAGCTGA 1929 44.58 MSSVDDESTNALEEESLFRPETRPRQIPNGNAVENGPFAGDSRAMGYKRLNIAVYKSVKTVVFSNKLNFLIPFGPLAILVDKLTGHHGWVFFFSLLGIVPLAERLGYSTEQLVFYTGATVGGLLNASFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLVHRKKEQTFSKSTAVVNSGLLLMAVMGLLFPAVLYYTHSEAHFGTSELALSRFTSCIMLVVYAAYLFFQLKSQEKLYASPAEDGNQNCMDAGDDDEAAEISKLESIIWLFIMTAWISILSEYLVHAIEGASISFGIPITFISVILLPIVGNAAEHASAILFAMKDKLVRLPTQHLFSAVTMNCNNFWVSMQDISLGVAIGSSTQISMFGMKSPMLYCILQVPFSVVIGWMMGQPMDLNFKLFETATLFITVIVVAFLLQDTLRSPPPENQTMKTASAVAIFVTTVFYLCFGCFGYAAFGSDTPGNLLTGFGFYEPFWLVDFANACIVVNMLGGYQMYSQPVFGAAQRWFSAKFPSSDYVNRFYSIKLPWLPGFQLNFFRLTFRTAYVVSTTALAILFPYFNEVLGVLGALNFWPLAIYFPVQMYFVQKKIRPWTRPWFVLGAFCLFGFLVSVMGLIGSMEGLINAKLS 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7159398 7166283 - Bma011110.2 Bma14g00662 94643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00662 642 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 365 434 IPR004713 GO:0006812|GO:0008324|GO:0016021
Bma14g00662 642 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 4 341 IPR004713 GO:0006812|GO:0008324|GO:0016021
Bma14g00662 642 Gene3D - 117 255 IPR044880 -
Bma14g00662 642 Gene3D - 266 467 IPR044880 -
Bma14g00662 642 MobiDBLite consensus disorder prediction 1 36 - -
Bma14g00662 642 Pfam Sodium/calcium exchanger protein 89 244 IPR004837 GO:0016021|GO:0055085
Bma14g00662 642 Pfam Sodium/calcium exchanger protein 280 464 IPR004837 GO:0016021|GO:0055085
Bma14g00662 642 TIGRFAM cax: calcium/proton exchanger 70 341 IPR004798 GO:0006816|GO:0015369
Bma14g00662 642 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 365 434 - -
Bma14g00662 642 Pfam Transmembrane amino acid transporter protein 418 632 IPR013057 -
Bma14g00662 642 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 4 341 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00758 Bma-Chr8:44528902 Bma14g00662 Bma-Chr14:7159398 9.66E-74 dispersed
Bma09g01003 Bma-Chr9:49521718 Bma14g00662 Bma-Chr14:7159398 6.17E-159 dispersed
Bma14g00662 Bma-Chr14:7159398 Bma12g00897 Bma-Chr12:40332592 3.97E-178 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00662 K07300 - cit:102629460 562.762