Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00667 ATGCCGCAAGAGAGCTATTCCGGCTCCATTTTCACGTCACCTGGGAAGAACTTGAGAGGGCTCAAAGCTCTAGTTTGTAACAACAACGAGGCTTCCTTTACCGAGGAGATTATCAACGACGATGAGTTGGCTCAGAGGAAAGCTGGAGAAGCAGCTTCAAGGAGGAGCCAAGCAGCGGAATGGCTGCGTCGGATGGACCATGGAGCATCGGAATCACTCTCCAAAGAGCCGTCGGAAGAAGGATTCTGCCTCGCCCTTCGTAACGGTCTAATTCTGTGCAATGTTCTCAATAAAGTCAATCCCGGAGCAGTCTACAAGGTGGTGGAAAATCCAGTAATAGCTGTTCAGTCAACTGAGGGAGCCGCTCAATCTGCCATTCAGTATTTTGAGAACATGAAGAACTTCTTGGATGCTGTTAAGGACATGCAGCTCTTGACATTTGAAGCATCTGATTTGGAGAAGGGAGGTTCTTCGAATAAAGTTGTGGACTGCATTCTCTGCCTAAAAGGGTATTACGAGTGGAAGCAAGCAGGCGGCATTGGGGTTTGGAGGTATGGAGGGACGGTCAGGATCGTGTCCTTGCCGAAGGAATTGCCCTCCTCCTTGATTGGAAGTGAGAGTGCCGATGAGTCGATCGATGAATCCGAATCATCACGATATGAGCAGCTTTTAGAGTTTCTCAATTATTCCAACGAGGTTTCAGACGAAGAATCGAGAATTGCCAATACTATGGCCTTTCTTTTTGATCATTTTGGACTTGGACTTCTTCAGGCTTACCTCCAAGAGAGTCATGGATATGAAGACTTGCCTCTGAGTACAATGACGATCGATATGTTGTTGAGTAAGGTTGTCAAGGATTTGTCTGCCCTGCTGGTTTCTCAAGGGACTCAGCTTGGACTTTTTCTGAAGAGAATATTGAAAAATGATGCTGGATTTCTATCGAAATCTGAATTTATGGAAATCATTGGCCAATATATTGCGAACAGAAGGAGCCTCGTATCGAACGATTTCTCAAAATTCTGTGTATGTGGAGGTAAACTTGAGGTTGTTCAGCAAAAAGATAGTGTTTCAGATGGCTATGGAGAATTGATGGACATTCAGAATAGACAGCTCCAGATGTTGAAATCGTCATTCCAAGAATCAAAACTAGAAATCAAGCAGATTCACGCGAGTTGGGAGGAAGAACTAAGAAGGCTAGCTCATCATCTCAAATCGCTCGAACAAACTTCTTCCTCCTATGAGAGAGTCCTGCAAGAAAATCGGCAGCTTTACAATCAAGTCCAAGATCTTAAAGGTACCATCAGGGTCTATTGCAGAGTGAGGCCATTTTTACCAGAGCAATCAAATGTGCAGTCTACTGTGGACTATATTGGAGAAAATGGAAATATTATGATTGTAAATCCACTGAAGCAGGGCAAAGATGCAAGAAGAGTGTTTTGCTTCAATAAAGTATTTGGAACAAATGTCACACAAGAGCAAATATACGATGACACTCAATCATTGATTAGATCCGTTTTGGATGGATTTAATGTATGCATATTTGCGTATGGACAAACCGGCTCTGGGAAGACTTATACAATGAGTGGCCCTGATCTTATGACCGAACAAACATGGGGTGTAAACTATCGAGCTCTACGCGACTTATTTGAGATATCCAAGACAAGGGTGAAAATGATAAAATATGAAGTTGGCGTTCAAATGATTGAAATTTATAACGAACAAGTGAGGGATCTTCTAGTCAGCGATAGCTCCAACAAAAGATATCCTCGATCTTCTAGTCAGAGTGCTATTTTAAACAACTCTCAGTTAAGTGGACTTAATGTCCCAAATGCAAGCTGGGTTCCAGTCACTTGTACTCAAGATGTTCTTGATTTGATGAAGATCGGCCATGGCAATCGTGCTGTAGGTGCTACTGCTCTAAACGAGCGAAGCAGCCGGTCTCATAGTGTTTTAACAGTTCATGTTCTTGGGAAAGAGTTGGTCTCTGGATCCATTCTGAGAGGCTGTCTCCATCTGGTGGACTTGGCTGGAAGTGAGAGAGTGGATAAATCTGAGGCTGTGGGAGAGAGACTGAAGGAAGCTCAACATATAAATAGATCTCTCTCTGCACTTGGAGATGTCATTTCAGCTCTCGCGCAAAAAAGTGCTCATATTCCTTACCGAAACAGCAAGCTTACTCAGTTGCTGCAAGATTCCTTAGGAGGGCAAGCCAAAACATTGATGTTTGTCCACATAAATCCCGACGTGAATGCACTCGGCGAGACTGTAAGCACGCTCAAGTTTGCCGAGAGAGTTGCATCCATAGAACTAGGCGCTGCTCGATCGAATAAAGAAAATGGTGAAATCAGAGAATTAAAGGAGGAGCTATCAAGCCTTAAGTCAGTATTGGAGAAAAAGGAAGCAGAAATCGAGAGATTGAAGAGCGCAAATGCTCGAACAATTGTAGAAACTCAAAAGACAAGACCTGTTTCTCCCTTCCCAATGCCAAGATGTGGTATTTCTGCCAGTTTGAGGCCTGAAAATGGTCAAGTTGCTGATCCTAGAAGCTCAGGGGCCAGAAGCTGTTCTTCAGGTAAGCACAGAAGGTCGAGATTTCCCTCTGTGCTTACAGAAAAGGAGATCATTCCAAAGATTCATCTGCTATCCGAACAGAAATCAGACAGCTCGGGAAAAACGAGCTCGCCATCTCCACCGGTTAGAAGATCACTATCAACAGACAGAGGCAGCATCATTAGAAGCAAGATTAAGAATAATGGAGCTATTGAGAATCAACCAATATTGAAGTTTCCTTTTCCGTCGAGAATTCCTATCAACAAATCTGTCTCAACAACGGCAATACCTTCGATCGATAAGAATGGAACAAACGACAAAGTTTCTGATGTGTTTTTGAACTTGCAAAAAGTGACTAGTTCGGAAAAAGTTTTCTCAGAGCAAGAAGAGGAGAATTTTATGCAAGCTCTCAATGGAAGGCAAGGTGGAATTAGGAAGAGCAGAATTGAGGGTAAGTCTAAAGCCAAACAGCATCAACTTCCAGTAGCTCGGATTCAGAATATTGACGAAGTCACAACATTGCTAGCTGATATAAACGTCCATGAGAAGGCTCGAAAGAACGAGTTCTCCGAGAGGGAAAATGATCTAATAGGATCTCAATCTTCCAGTAGAGACAACTCCGGCAAGCAAAACCGACAGAACTTCTCAAGAAACTCTCAAAATGTGGAACCAAGGGGAGCATCACCTGCAGTAGAATCCATGATGGCTGGGAAGCTTGAGAACAAGCTACCAAATGGCGGAATTCGCCATACGAAGGAAGGAAACAACACAACAACCGTTTCGAATTCAAGATGGAGCCGAACTTCGCCTCGCGGAAAATATTTTGTTTTGCCTTGA 3387 43.43 MPQESYSGSIFTSPGKNLRGLKALVCNNNEASFTEEIINDDELAQRKAGEAASRRSQAAEWLRRMDHGASESLSKEPSEEGFCLALRNGLILCNVLNKVNPGAVYKVVENPVIAVQSTEGAAQSAIQYFENMKNFLDAVKDMQLLTFEASDLEKGGSSNKVVDCILCLKGYYEWKQAGGIGVWRYGGTVRIVSLPKELPSSLIGSESADESIDESESSRYEQLLEFLNYSNEVSDEESRIANTMAFLFDHFGLGLLQAYLQESHGYEDLPLSTMTIDMLLSKVVKDLSALLVSQGTQLGLFLKRILKNDAGFLSKSEFMEIIGQYIANRRSLVSNDFSKFCVCGGKLEVVQQKDSVSDGYGELMDIQNRQLQMLKSSFQESKLEIKQIHASWEEELRRLAHHLKSLEQTSSSYERVLQENRQLYNQVQDLKGTIRVYCRVRPFLPEQSNVQSTVDYIGENGNIMIVNPLKQGKDARRVFCFNKVFGTNVTQEQIYDDTQSLIRSVLDGFNVCIFAYGQTGSGKTYTMSGPDLMTEQTWGVNYRALRDLFEISKTRVKMIKYEVGVQMIEIYNEQVRDLLVSDSSNKRYPRSSSQSAILNNSQLSGLNVPNASWVPVTCTQDVLDLMKIGHGNRAVGATALNERSSRSHSVLTVHVLGKELVSGSILRGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVISALAQKSAHIPYRNSKLTQLLQDSLGGQAKTLMFVHINPDVNALGETVSTLKFAERVASIELGAARSNKENGEIRELKEELSSLKSVLEKKEAEIERLKSANARTIVETQKTRPVSPFPMPRCGISASLRPENGQVADPRSSGARSCSSGKHRRSRFPSVLTEKEIIPKIHLLSEQKSDSSGKTSSPSPPVRRSLSTDRGSIIRSKIKNNGAIENQPILKFPFPSRIPINKSVSTTAIPSIDKNGTNDKVSDVFLNLQKVTSSEKVFSEQEEENFMQALNGRQGGIRKSRIEGKSKAKQHQLPVARIQNIDEVTTLLADINVHEKARKNEFSERENDLIGSQSSSRDNSGKQNRQNFSRNSQNVEPRGASPAVESMMAGKLENKLPNGGIRHTKEGNNTTTVSNSRWSRTSPRGKYFVLP 1128
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7234114 7240163 + Bma011116.1 Bma14g00667 94648

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00667 1128 Coils Coil 775 816 - -
Bma14g00667 1128 Pfam Calponin homology (CH) domain 54 173 IPR001715 GO:0005515
Bma14g00667 1128 Pfam Kinesin motor domain 439 768 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma14g00667 1128 PANTHER KINESIN-LIKE PROTEIN KLP-3 24 1121 - -
Bma14g00667 1128 MobiDBLite consensus disorder prediction 821 917 - -
Bma14g00667 1128 SMART ch_5 54 171 IPR001715 GO:0005515
Bma14g00667 1128 Coils Coil 389 433 - -
Bma14g00667 1128 MobiDBLite consensus disorder prediction 882 917 - -
Bma14g00667 1128 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 434 804 IPR027417 -
Bma14g00667 1128 MobiDBLite consensus disorder prediction 1044 1076 - -
Bma14g00667 1128 SMART kinesin_4 431 776 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma14g00667 1128 ProSiteProfiles Kinesin motor domain profile. 433 768 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma14g00667 1128 PANTHER KINESIN-LIKE PROTEIN KIN-14F 24 1121 - -
Bma14g00667 1128 Gene3D - 44 173 IPR036872 -
Bma14g00667 1128 Gene3D Kinesin motor domain 376 770 IPR036961 -
Bma14g00667 1128 SUPERFAMILY Calponin-homology domain, CH-domain 53 190 IPR036872 -
Bma14g00667 1128 ProSiteProfiles Calponin homology (CH) domain profile. 52 173 IPR001715 GO:0005515
Bma14g00667 1128 MobiDBLite consensus disorder prediction 1036 1128 - -
Bma14g00667 1128 PRINTS Kinesin heavy chain signature 638 655 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma14g00667 1128 PRINTS Kinesin heavy chain signature 508 529 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma14g00667 1128 PRINTS Kinesin heavy chain signature 669 687 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma14g00667 1128 PRINTS Kinesin heavy chain signature 718 739 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma14g00667 1128 MobiDBLite consensus disorder prediction 1100 1119 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00667 K10406 KIFC2_3; kinesin family member C2/C3 - qsu:111992149 1530.0
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bma05g00820 Bma14g00667 CCT
Bma12g00075 Bma14g00667 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00820 Bma-Chr5:45530211 Bma14g00667 Bma-Chr14:7234114 0 dispersed
Bma06g00477 Bma-Chr6:22396967 Bma14g00667 Bma-Chr14:7234114 0 dispersed
Bma10g00295 Bma-Chr10:2720125 Bma14g00667 Bma-Chr14:7234114 3.07E-10 dispersed
Bma14g00667 Bma-Chr14:7234114 Bma14g01310 Bma-Chr14:23960747 3.28E-45 dispersed
Bma14g00667 Bma-Chr14:7234114 Bma13g00612 Bma-Chr13:14475688 4.37E-44 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g320 Blo02g01110 Blo03g00212 Bda06g00112 Bda08g00516 Bpe05g00646 Bpe07g00107 . Bma14g00667 . . Cma02g01449 Cma15g01228 Car02g01216 Car15g01107 . . Cpe05g00339 . . . . . . . Cla10g00365 Cam10g0377 Cec10g0397 Cco10g0390 Clacu10g0383 Cmu10g1218 Cre10g0632 Cone8ag0301 Cone12ag0307 . . . Csa05g00279 Chy09g01230 . . . . . . Bpe11g00603 Bma05g00820 Bma12g00075 . Cmo02g01485 Cmo15g01292 . . . . . Cpe13g00155 Bhi12g00265 . . . . . Lcy12g1649 Cla01g00260 . Cec01g0258 Cco01g0273 . . Cre09g2254 Lsi09g00255 . . Cme09g01765
Vvi19g727 Blo03g00494 . . . . . . . . . Cma01g01058 Cma09g01033 Car01g00932 Car09g00939 . Cpe06g00841 Cpe02g00838 Bhi09g01820 . . . . Mch11g1312 . . . . . . . . Cone6ag0001 Cone9ag0003 . . Lsi02g01801 Csa07g01062 . . . . . . Bpe11g00603 . . Bma14g00667 . Cmo01g01099 Cmo09g01035 . . . . . . . . . . . . . Cla09g02100 Cam09g2186 Cec09g2255 . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007328 0 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 2 1 1 1 1 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g00667 Bma_Chr14 FPKM 0.0 0.0 0.0 0.019085 0.0 0.0 0.0 0.103907 0.065571 0.073651