Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00671 ATGGGAAGGAGGAAGGAGCGTCGCCTCGCTTCCATCTCCAACGCTGGTCGCCGTGTCAAGCTCGATCTCTTCGCGGAACCCTCTGGAGAATTGGATGGCTCTGATGTACAGGAGGAAGTTGGAGGAAATATAGAGTCAAAGCAGAGGACTGGGTTACCCAATTCACCCTCTTCTTCAGTTTTTGATATAATTGTATTTGTGTTTTCAGGTCAGCAACCACAGAATCCTTTGTTGTTACTTGGGCAATACAGTGACGATGTGGACGAAGAATTGAGTGTGGATCACAAAGCTGCAGAAAGTTCCATGTCTGCTCATAATGCTGAGGTGGCAGATCCTCTTATTGAAGAAAGCAAGGATTGGGATGCCAGTGATGATTCAAAGCTTCCTGTCCCAGAGTTCAATCAAGAGGAAATAGAGGGAAAGGCACTTGATGTTCCTGAGGATGTGGAAGTTGCCAACATTAGAGAAAATGCTGCAGCTATAGATGTCATCGAACAAGCTTCTGTTCCTGGAACTTCTGACGTGTCAGTAATAGGGGATGTTAGTTCAGGCTGGAAGATAGTAATGCATGAAGAGAGTAATAATTATTATTACTGGAATACTAAAACTGGGGAAACTTCATGGGACGTACCTGATGTTTTGGCTCAGGTTACTCAACCATTCAGTGATCAGAGCTCTTTCCCAGTAAATGATACCATCTCTAAGCAGGAGCCCAACTTGATTAACGGATCTTTAGATGCAGACACTGCGGCAAGATCAGTTGATGATAGTAGCACGCGGGAATGTACCGGATTGATCAGAAAGGGATCCCAAATGAATGGTCTTGAAGGTGATACGACTAGAGTCGCAGAAAGTTCAACTTTGCTATTTAATAATAACCAAACTGAGTCAACAAGTAATTCTGAATTGACTGATGCATGTTTTGGTGTCACGAGTTCGTTAAGACCTTCTTCTGCCCCTGCCCATTACATGCACAATGTGGTAGTAACTGAAGAACTTAAGTCCGGGTTTAATCTTTCTTCTCAGCTTATTTGTCAGAGCAGAAGCTTGTTGGATAGATTAAATTCATTGAAAGGGTCTAATTACCCTCAAGGTTATGATTGGACGATGAAGTATATTATGGAAATTCATATCAGACTTTCAGATTATGAGGCACTTATACCTTATGAGACAGCCTTGCTCCCATATTGGGAGCATTCAGAAAGACAGCTCAAGCAACTAGAATCTGCTATTAATGAGGAAATTTACCAAATGGCTATATTGGTCCAATCGGATGCTCCTGCAACTGATTTTACATTTGAAGAAAATGGAAAATTGCAGAGTAGACTGGAGTTTGAGTCTGAAGCCGAAAGAGTTAAAAATGCAGCATCTACCTCTGAAGATACTCCAAATATTGGTACACTAATACGCCATCAAGGAGATCTTGAGAATGAAGCTCCAGTTGGACATGTTTCATCATTTGAAGCTGCAAAGCAATTAGAAAGTGGTTCTCAAGTGAATGAATTAGTCAGTGGTGCTTTGTCTAATGAATTACCAATCAAACATGGGCCAGATTCTGGAGAAGATGTTGATATGGATGTGGACATGGAAGTTGAAGATTTTGATTCCGCAGAGAACAGAACCATAGATGCAGAGAATGCAAAAGAGTCACTTGGTCAGCCCAATCCACCAGCAGGCTATACATCTGTTGTGGTAGAAAATGGGCCTATTGTTCCACCTCCACCAGATGAAGAATGGATTCCCCCACCACCACCTGATAACGAAGACATTCCTCCTCCCCCTCCTGATGAACCACTTGAACCATCATATGTTCTTCCCCCATCTTACACACAAACTGCACCACTTTTATATGCGGAGCAAATTAACATGCCTTATCCAGAAGCTAATTTTGAATATTATGGACTACCTGTTGCTGAGGTTTCCAACAATAACTTCTATGCACATTCTGATGTTGCTTTGTCTCATGCAGCACTCTACTATTCAGCAGTTACTAATGCATATAGTGGTGGTCCAGTCATTGTTAATCCAGTGGAGCCTGAAGCTTATAATAGTCTTCAAAGTGGATTAATACCTGATCTTCCTGTTAGTGCCGTGGCATCCCAATTGTTTCCTATTTCTCCCTCTGGTGCCTTCAGTAGTTCTGCCCCTGATCAAAATGAATCAACTGAGATAGCAAAGGCACACGTAGATGGTTTTGCTATTAATGAGGCTGATAAGGCTCAAGGAGGAAGTGGCACAGCTACAATTCAGGCCCATCCAACTGTCTCCACACAAGACAAGGATGCTGTATTACCAATTAAAACAATATCTGTTGCGCCAGCTACTTCTACTGTATCAGCAGCGCTTGCAAAGAATCAATCAAAAGGTGTGCGTAGTAAAAAGCGGGCAGTTGCTGTTGCACCCTCGTTGAGATCTAATAAGAAAGTTTCGAGTTTGGTTGATAAGTGGAAAGCTGCAAAGGAAGAACTACTTGAAGACGAGGAAGAACCGGAGACAGCCTATGAGATGTTAGAAAGAAAGCGACAAAGGGAAATTGAGGAGTGGCGTGCTCTTCAGATAGCTAGTGGAGAGGCAAAGGAGAATGCAAACTTTCAGCCATTGGGTGGTGACTGGCGGGAGCGAATAAAGCGTCGGAGAGCTCAATCAGCCAAGGACACCGAACGGTCCTCTCCTGAAACACGGCATGATGGAAACCAGCAGCCCGATTTGATAGAGCTATCAAGCAATCTTCCATCTGGGTGGCAGGCATATTGGGATGAATCCTCTAAGAAGGTGTATTATGGTAACGTTGTAACCTCAGAGACATCTTGGTCCAGACCCAAATGA 2826 43.17 MGRRKERRLASISNAGRRVKLDLFAEPSGELDGSDVQEEVGGNIESKQRTGLPNSPSSSVFDIIVFVFSGQQPQNPLLLLGQYSDDVDEELSVDHKAAESSMSAHNAEVADPLIEESKDWDASDDSKLPVPEFNQEEIEGKALDVPEDVEVANIRENAAAIDVIEQASVPGTSDVSVIGDVSSGWKIVMHEESNNYYYWNTKTGETSWDVPDVLAQVTQPFSDQSSFPVNDTISKQEPNLINGSLDADTAARSVDDSSTRECTGLIRKGSQMNGLEGDTTRVAESSTLLFNNNQTESTSNSELTDACFGVTSSLRPSSAPAHYMHNVVVTEELKSGFNLSSQLICQSRSLLDRLNSLKGSNYPQGYDWTMKYIMEIHIRLSDYEALIPYETALLPYWEHSERQLKQLESAINEEIYQMAILVQSDAPATDFTFEENGKLQSRLEFESEAERVKNAASTSEDTPNIGTLIRHQGDLENEAPVGHVSSFEAAKQLESGSQVNELVSGALSNELPIKHGPDSGEDVDMDVDMEVEDFDSAENRTIDAENAKESLGQPNPPAGYTSVVVENGPIVPPPPDEEWIPPPPPDNEDIPPPPPDEPLEPSYVLPPSYTQTAPLLYAEQINMPYPEANFEYYGLPVAEVSNNNFYAHSDVALSHAALYYSAVTNAYSGGPVIVNPVEPEAYNSLQSGLIPDLPVSAVASQLFPISPSGAFSSSAPDQNESTEIAKAHVDGFAINEADKAQGGSGTATIQAHPTVSTQDKDAVLPIKTISVAPATSTVSAALAKNQSKGVRSKKRAVAVAPSLRSNKKVSSLVDKWKAAKEELLEDEEEPETAYEMLERKRQREIEEWRALQIASGEAKENANFQPLGGDWRERIKRRRAQSAKDTERSSPETRHDGNQQPDLIELSSNLPSGWQAYWDESSKKVYYGNVVTSETSWSRPK 941
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7279356 7285396 + Bma011122.1 Bma14g00671 94652

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00671 941 ProSiteProfiles WW/rsp5/WWP domain profile. 179 213 IPR001202 GO:0005515
Bma14g00671 941 MobiDBLite consensus disorder prediction 41 55 - -
Bma14g00671 941 CDD WW 911 940 IPR001202 GO:0005515
Bma14g00671 941 Gene3D - 905 941 - -
Bma14g00671 941 CDD WW 183 212 IPR001202 GO:0005515
Bma14g00671 941 ProSiteProfiles WW/rsp5/WWP domain profile. 908 941 IPR001202 GO:0005515
Bma14g00671 941 Gene3D - 180 223 - -
Bma14g00671 941 ProSitePatterns WW/rsp5/WWP domain signature. 185 211 IPR001202 GO:0005515
Bma14g00671 941 MobiDBLite consensus disorder prediction 568 601 - -
Bma14g00671 941 ProSitePatterns WW/rsp5/WWP domain signature. 914 940 IPR001202 GO:0005515
Bma14g00671 941 SMART ww_5 180 213 IPR001202 GO:0005515
Bma14g00671 941 SMART ww_5 909 941 IPR001202 GO:0005515
Bma14g00671 941 MobiDBLite consensus disorder prediction 545 601 - -
Bma14g00671 941 Pfam WW domain 183 211 IPR001202 GO:0005515
Bma14g00671 941 Pfam WW domain 910 940 IPR001202 GO:0005515
Bma14g00671 941 PANTHER OS06G0298400 PROTEIN 1 940 - -
Bma14g00671 941 SUPERFAMILY WW domain 906 940 IPR036020 GO:0005515
Bma14g00671 941 MobiDBLite consensus disorder prediction 26 55 - -
Bma14g00671 941 MobiDBLite consensus disorder prediction 859 908 - -
Bma14g00671 941 MobiDBLite consensus disorder prediction 870 899 - -
Bma14g00671 941 SUPERFAMILY WW domain 173 213 IPR036020 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00671 K24774 FNBP4; formin-binding protein 4 - qsu:111992155 639.032
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g719 . . Bda07g00423 Bda09g00442 . . . . . . Cma01g01060 Cma09g01029 Car01g00934 Car09g00932 Sed04g3626 Cpe06g00836 Cpe02g00836 Bhi09g01804 Tan01g3218 Cmetu01g2692 . . Mch11g1304 . . . . . . . . . . . . Lsi02g01808 . . . . . . . Bpe11g00598 . . Bma14g00671 . Cmo01g01101 Cmo09g01031 . . . . . . . . . . . . . Cla09g02097 Cam09g2183 Cec09g2250 . . . . . . Chy01g01120 Cme01g00868
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004218 2 2 0 1 1 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 1 1 1 3 4 1 42
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g00671 Bma_Chr14 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0