Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00672 ATGGCAACCAGAATGTCTAGAGCTAGATGGTTCATTTTCTTAAGAAAAGTATTTCATTACCAGAACAGTTCGAGATCTGATCTGGGTTCTAATCCTTTAAATTCCAGCACCTGGATGATGATGGAGCTTATAGCTTTGGTAGCTCAGATAAGTTTGATAGTATTTACTCTACATATATCTAAGAGTGAGAAGCCAGTTTGGCCTATGAGACTGTGGATTACTGGTTATGGTATTGGTTGCTTCCTCGGTTTGCTCTTGCTCTTCGGTCGATATCGGCTTCTTTGTCTGAATCTTTCTGATGTGGAGCAGCAGAACAGAGACAGTGAAGAATCAAGGACCTCACATTTGAGAAACAAATGCCAGACATCTCTCGAGCTTTTCTTCGCAATATGGTTTGTCATCGGCAATGTTTGGATCTTCGACTCTCGCTTCGGTTCATATGACCAAGCCACAAAGCTCCACTTCCTCTGCATATCACTCTTATCATGGAACGCCATTTGCTACACCTTTCCGTTCCTCCTTTTCCTTCTGCTCTGCTGCTTTGTGCCATTGGTCAGCCGCTTTTTAGGCTACAACATGAACGTGGGTTCGGCCAATCGAGGGGCCTCCGACGAACAGCTATCTCAGCTGCCTAGCTGGAGATATAAACCGGTTAAAGTCGATTTAGAGCTCGAAACGGACTTGGAAAGCGATTCCACCCTAGCAACCAAAGAAGAGCTGGAATGCTGTATTTGTCTTGCAAAGTATATGGAGAGGGAGAAAGTGAGGGAGTTGCCTTGCTCACATATGTTTCATCTCAAGTGTGTTGATCAATGGCTGAGAATCATCCCCTGTTGCCCACTTTGCAAACAAGAGCTAGACGGTAGTACGTGA 873 44.67 MATRMSRARWFIFLRKVFHYQNSSRSDLGSNPLNSSTWMMMELIALVAQISLIVFTLHISKSEKPVWPMRLWITGYGIGCFLGLLLLFGRYRLLCLNLSDVEQQNRDSEESRTSHLRNKCQTSLELFFAIWFVIGNVWIFDSRFGSYDQATKLHFLCISLLSWNAICYTFPFLLFLLLCCFVPLVSRFLGYNMNVGSANRGASDEQLSQLPSWRYKPVKVDLELETDLESDSTLATKEELECCICLAKYMEREKVRELPCSHMFHLKCVDQWLRIIPCCPLCKQELDGST 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7287258 7288806 - Bma011123.1 Bma14g00672 94653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00672 290 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 1 287 - -
Bma14g00672 290 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 287 - -
Bma14g00672 290 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 288 IPR013083 -
Bma14g00672 290 SUPERFAMILY RING/U-box 235 286 - -
Bma14g00672 290 Pfam Ring finger domain 241 283 IPR001841 -
Bma14g00672 290 ProSiteProfiles Zinc finger RING-type profile. 242 283 IPR001841 -
Bma14g00672 290 SMART ring_2 242 282 IPR001841 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma13g01130 Bma14g00672 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g01130 Bma-Chr13:44393231 Bma14g00672 Bma-Chr14:7287258 1.21E-128 dispersed
Bma14g00672 Bma-Chr14:7287258 Bma15g00389 Bma-Chr15:4321863 3.33E-42 dispersed
Bma14g00672 Bma-Chr14:7287258 Bma01g01300 Bma-Chr1:17778344 1.96E-52 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00672 - - twl:119986263 404.831