Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00682 ATGGCTGAATCAGAGGACGAGTCCGGAGGCGGACAGGCCACAGGGAGGAGCACGAACAGGGGGCTGTCGTTACGGGAGCAGGACCGGCTGTTGCCGATAGCGAACGTAGGAAGGATCATGAAGAAGGCGCTACCGGCGAACGGGAAGATCTCGAAGGAAGCGAAGGAGACGGTGCAAGAGTGTGTATCGGAGTTCATCAGCTTCATCACGGGAGAGGCGTCAGAAAAGTGTCAGAGAGAGAAGCGGAAGACGGTAAACGGAGACGACTTGCTCTGGGCGATGACGACGTTAGGTTTCGAGGACTACGTTGAACCTCTGAAGATTTACTTGCTGCAGTTCAGAGAGATGGAAGGAGAGAAGTGCGTGGCGGCGCGTGGGAGAGATGGCGGTGGGGAGGAAGGGAGTGGGTTCGTGGGTGGAACTGGAACGGGGATGATGATGATGACGATGGGTCAGCATCAGCCGGAGCATCGCCAAGGACACCTGTATGGATCATCAGGCACACATCAGACGGCTGTGAGTGGCGCTGGCTACTGCGGGCGTGGGCCAGGCTACTCTAGCCGCGTGTCTAACAGCGGGAGGCCATCATAG 591 58.04 MAESEDESGGGQATGRSTNRGLSLREQDRLLPIANVGRIMKKALPANGKISKEAKETVQECVSEFISFITGEASEKCQREKRKTVNGDDLLWAMTTLGFEDYVEPLKIYLLQFREMEGEKCVAARGRDGGGEEGSGFVGGTGTGMMMMTMGQHQPEHRQGHLYGSSGTHQTAVSGAGYCGRGPGYSSRVSNSGRPS 196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7366950 7367540 - Bma011133.1 Bma14g00682 94663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00682 196 MobiDBLite consensus disorder prediction 174 196 - -
Bma14g00682 196 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2 1 165 - -
Bma14g00682 196 MobiDBLite consensus disorder prediction 1 25 - -
Bma14g00682 196 SUPERFAMILY Histone-fold 27 125 IPR009072 GO:0046982
Bma14g00682 196 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Bma14g00682 196 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Bma14g00682 196 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Bma14g00682 196 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
Bma14g00682 196 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bma14g00682 196 Gene3D Histone, subunit A 20 137 IPR009072 GO:0046982
Bma14g00682 196 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 165 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma13g01113 Bma14g00682 CCT
Bma10g00590 Bma14g00682 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00635 Bma-Chr13:15209636 Bma14g00682 Bma-Chr14:7366950 2.90E-35 dispersed
Bma14g00682 Bma-Chr14:7366950 Bma13g01113 Bma-Chr13:44263196 3.69E-72 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58334 PF00808 CBFD_NFYB_HMF 2.10E-27 CL0012 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00682 K08065 - mnt:21401200 220.32