Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00698 GAAATGTATGGAAGAAAGGCATTTCAGCTGCTGAAGGAGCTTTCAACTAGCGAGAAGGGGCAGTTGAAGCTCTTCAATAGTGATCTTTTTGACCAAGTGATTGCAGAATGTAATCAACATCACCTCGAGCTTCAGTTCTTGATAAGGAAAATGCAAGAAGAAGGAATGGATCTTCAGACAACTAAAAACGCAGACCACTTTGGGGCACTCATTCACCACCTTGCTTTAGTCCGGAATAAACGCTGTTTGATGGCATATGCCTACAATCGAGCTGAATTCACTCGGAGTTTGATGTGGAAGGTAGGAACCGTGCTTCCACAAGAAATTGAAGTAAAGCTCAGCCACTCGGAGGAGGAGTATTTTAAGAAACACTCTGCAGCTCTGAAATCATTTATGTCAAAACTGGAACTTGATTTAACTGTGGATATGATGCCACCCAAAGATCCTTATATCCAGGTTAGAGTTCTCGATGATATTGGAGAAGGAATTGTCCTCAGTGATGATAAGACAGCAAATTTTGCTCGACATTCAATGCACTTTCTTAAACGAACCGATGCTGAGCAGTTCATTTCTCGAGTAAGATAG 585 41.71 EMYGRKAFQLLKELSTSEKGQLKLFNSDLFDQVIAECNQHHLELQFLIRKMQEEGMDLQTTKNADHFGALIHHLALVRNKRCLMAYAYNRAEFTRSLMWKVGTVLPQEIEVKLSHSEEEYFKKHSAALKSFMSKLELDLTVDMMPPKDPYIQVRVLDDIGEGIVLSDDKTANFARHSMHFLKRTDAEQFISRVR 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7592368 7594697 + Bma011150.1 Bma14g00698 94679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00698 194 SUPERFAMILY GINS helical bundle-like 2 147 IPR036224 -
Bma14g00698 194 Pfam GINS complex protein 49 117 IPR021151 -
Bma14g00698 194 CDD GINS_A_psf1 4 137 IPR005339 GO:0000811|GO:0006260
Bma14g00698 194 Gene3D - 2 135 - -
Bma14g00698 194 PANTHER PARTNER OF SLD5 2 193 IPR005339 GO:0000811|GO:0006260
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00026 Bma-Chr8:424444 Bma14g00698 Bma-Chr14:7592368 2.96E-144 dispersed
Bma13g00787 Bma-Chr13:28434463 Bma14g00698 Bma-Chr14:7592368 1.25E-143 dispersed
Bma14g00519 Bma-Chr14:5764907 Bma14g00698 Bma-Chr14:7592368 2.45E-144 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00698 K10732 - csv:101205409 321.242