Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00711 ATGGCGGTCCCAGATTACAAAACGAACCCGAAATTCGGAGATTTTTTACGTTCGGAAGACGCGTATTGTGCTACTCCGCCGAACAAACGGCCCCGGCACGAGAGTTGCGACCCGTTCGGGAAATTCAAAGGCGTCGTTATGCAGCAAAACGGGCATTGGGGGGCACAAAGCAAAGAACAGGTGAATTTATGCGACGGGAAATGTTCAAAGATCAAACTTTTTCAGAAGGAGCTGACGCCAAGTGACGTCGGAAAGCTCAACAGGCTCGTAATCCCGAAGAAAAACGCGACGAAATATTTCCCTTTCATCCGCGAAAACGACGACAACGACGTCGAGCTAGTTTTCTACGATAACTTGATGAAGATTTGGAAATTCAGATACTGTTATTGGAAAAGTAGCCAGAGCTTCGTGTTCACGAGGGGCTGGAACAGGTTTGTGAAGGAGAAGAAGTTGAAGGAGAACGACATAATATCGTTTTACTCGTGCGAAGAAGGCCAAAACAGCGTAGAAAATGGCTTCTCTTTCTGCTTGATCGACGTAGTTTACAGCAAAGAGAGAGAAACCGGAGCTGAAACCTGTTTGGCTGCCGAGAAAATTTGCAGCGAGACGAAGAACGTGGGATTGGAGCTGCACTTGGGGAATTTTCTCAGATTCAAACTTGACGGGAAAGAGAAGGAAAATGTTTTTGATGGGATGTATTCGATTCCAACTTGTGTTGAAGAGAAGGGTTTTAGGCTATTTGGAGTGCAAATCACCGCATTTAATACTTAG 771 45.65 MAVPDYKTNPKFGDFLRSEDAYCATPPNKRPRHESCDPFGKFKGVVMQQNGHWGAQSKEQVNLCDGKCSKIKLFQKELTPSDVGKLNRLVIPKKNATKYFPFIRENDDNDVELVFYDNLMKIWKFRYCYWKSSQSFVFTRGWNRFVKEKKLKENDIISFYSCEEGQNSVENGFSFCLIDVVYSKERETGAETCLAAEKICSETKNVGLELHLGNFLRFKLDGKEKENVFDGMYSIPTCVEEKGFRLFGVQITAFNT 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7769028 7770073 - Bma011167.1 Bma14g00711 94692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00711 256 Gene3D - 68 183 IPR015300 -
Bma14g00711 256 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 23 56 IPR044800 GO:0003700
Bma14g00711 256 ProSiteProfiles B3 DNA-binding domain profile. 74 181 IPR003340 GO:0003677
Bma14g00711 256 PANTHER AP2/ERF AND B3 DOMAIN TRANSCRIPTION FACTOR 23 56 - -
Bma14g00711 256 PANTHER AP2/ERF AND B3 DOMAIN TRANSCRIPTION FACTOR 66 252 - -
Bma14g00711 256 SUPERFAMILY DNA-binding pseudobarrel domain 69 169 IPR015300 -
Bma14g00711 256 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 66 252 IPR044800 GO:0003700
Bma14g00711 256 Pfam B3 DNA binding domain 74 163 IPR003340 GO:0003677
Bma14g00711 256 CDD B3_DNA 72 160 IPR003340 GO:0003677
Bma14g00711 256 SMART B3_2 74 170 IPR003340 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g00711 Bma-Chr14:7769028 Bma06g01360 Bma-Chr6:50471857 1.68E-31 dispersed
Bma14g00711 Bma-Chr14:7769028 Bma07g01046 Bma-Chr7:42169312 1.81E-29 transposed
Bma14g00711 Bma-Chr14:7769028 Bma14g00089 Bma-Chr14:1257805 1.52E-29 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58335 PF02362 B3 1.90E-24 CL0405 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00711 K09287 - qsu:111998385 201.445