Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00718 ATGGCAGCACAGGCTTTGGTCTCCTCCTCTCTAACATCTACGGTCCGTGCAGCCAGGCGTAGAATCGGAGGGAAACCACTGTTTCACTCGAGAAAATCAGCTTCGTTTTTCGTCAGAGCTGAAGCTACTCCTCCTGTTAAGCAAGGAGCGGATCGACAGTTATGGTTTGCGTCCAAACAGAGCCTTTCGTACTTGGATGGCAGTCTACCCGGCGACTTTGGATTTGATCCGTTGGGACTCTCAGATCCAGAAGGAACCGGAGGATTCATCGAACCAAAATGGCTAGCTTACGGAGAGGTAATCAACGGACGATTCGCCATGCTAGGAGCATTCGGAGCCATAGCACCCGAAATTTTCGGGAAACTTGGTCTCATCCCACAGGAAACCGCTCTTCCGTGGTTCCAAACCGGCGTGATCCCCCCGGCCGGAACCTACCACTACTGGGCGGATAACTACACGCTCTTTGTGTTCGAAATGGCGCTAATGGGATTCGCAGAGCACAGAAGATTCCAAGACTGGGCAAAACCAGGATCGATGGGAAAACAATACTTCCTCGGGTTGGAAAAGTTCTTGGGAGGATCAGGAGACCCGGCGTACCCAGGAGGGCCGCTGTTCAACCCTCTAGGATTTGGGAAGGACGAGAAATCGATGAAGGAGTTGAAACTGAAGGAGGTGAAGAACGGGAGACTGGCGATGTTGGCGATCTTCGGTTACTTCGTTCAGGCATTAGTGACGGGAGTCGGACCATTCCAGAACCTTCTGGATCATTTGGCTGACCCCGTAAATAACAATATCTTGACCAGCCTCAAGTTCCAT 816 51.72 MAAQALVSSSLTSTVRAARRRIGGKPLFHSRKSASFFVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAFGAIAPEIFGKLGLIPQETALPWFQTGVIPPAGTYHYWADNYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAIFGYFVQALVTGVGPFQNLLDHLADPVNNNILTSLKFH 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7896141 7897173 + Bma030677 Bma14g00718 94699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00718 272 Gene3D Chlorophyll a/b binding protein domain 53 271 - -
Bma14g00718 272 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 271 - -
Bma14g00718 272 Pfam Chlorophyll A-B binding protein 63 242 IPR022796 -
Bma14g00718 272 SUPERFAMILY Chlorophyll a-b binding protein 51 268 - -
Bma14g00718 272 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 271 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00987 Bma-Chr12:41910555 Bma14g00718 Bma-Chr14:7896141 2.07E-39 dispersed
Bma12g00994 Bma-Chr12:42023138 Bma14g00718 Bma-Chr14:7896141 1.89E-45 dispersed
Bma14g00718 Bma-Chr14:7896141 Bma02g01306 Bma-Chr2:55191335 1.34E-39 dispersed
Bma14g00718 Bma-Chr14:7896141 Bma04g01474 Bma-Chr4:50517231 6.80E-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00718 K08909 - csv:101202993 502.286