Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00744 ATGGATCAGCAGGAATTTCACCGTCTTCTTGATCTCTTTCCTGTTGTTCGATCTCGCTATTACCACGCGGAATCTGAGTTATCAAGACAGCCAACATCTAGTTCCGCTCAAGATGAGTTAAGGGAATGGCAAGATGCTTGGAATGAAGGGGATAGGAAGGATGTAAACAATAACAATTCAGACCAACATGATGCATTTTGGAAGAAGCTTAAATCTGCTGTTGAGAGAAAGGTTGACGCAGCGACAGCTGAGAGATTTTGCAAGGCTTTTCAACAAGTTCACAACAAAGTTGTGTTTGAAGAACTCAGTTTGGAGGCAGCTGGAAACTTCCTTGATTTACCTGCGAATGGAAAAGAGTAG 360 42.5 MDQQEFHRLLDLFPVVRSRYYHAESELSRQPTSSSAQDELREWQDAWNEGDRKDVNNNNSDQHDAFWKKLKSAVERKVDAATAERFCKAFQQVHNKVVFEELSLEAAGNFLDLPANGKE 119
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8232195 8235181 + Bma011212.1 Bma14g00744 94725

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00744 119 MobiDBLite consensus disorder prediction 23 62 - -
Bma14g00744 119 MobiDBLite consensus disorder prediction 25 41 - -
Bma14g00744 119 PANTHER OS07G0641800 PROTEIN 1 112 - -
Bma14g00744 119 PANTHER OS07G0641800 PROTEIN 1 112 - -
Bma14g00744 119 MobiDBLite consensus disorder prediction 42 62 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00744 - - - qsu:112035802 151.754
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bma11g00387 Bma14g00744 CCT
Bma11g00387 Bma14g00744 ECH
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi6g3 . . . . Bpe01g00409 . Bma14g00744 . . . . . . . . Cpe05g00576 . . . . . . . . . . . . . . . . . . . . . . . . . . . Bpe08g00340 . . Bma11g00387 Sed01g3430 . . . . . . . . Bhi10g00491 Tan07g0561 Cmetu05g1769 . Hepe08g0006 . . Cla03g01411 Cam03g1491 Cec03g1529 Cco03g1523 Clacu03g1514 Cmu03g2071 Cre03g1743 . . . .
Vvi6g960 . . . . . . Bma14g00744 . . . . . . . . . . . . . . . . . Cla02g02200 Cam02g2344 Cec02g2383 Cco02g2425 Clacu02g2317 Cmu02g2250 Cre02g2577 . . . . . . . Cme05g00214 . . Bda07g00769 . . . . . Sed01g3241 Cmo02g01329 . Cma02g01289 . . Car20g00105 Cpe16g00845 . Bhi10g00229 Tan07g0823 Cmetu05g1317 . Hepe08g0173 . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002420 2 3 2 3 1 1 3 1 1 1 2 1 2 2 2 1 1 4 2 1 1 2 1 1 3 1 2 5 3 2 57
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g00744 Bma_Chr14 FPKM 10.180919 12.040009 4.839807 5.558886 2.480061 1.567358 2.333997 1.244025 2.084683 2.116217