Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00754 ATGCTTGGTCTCCGAGACCTCTTCGTCGTCGCTCCGGCTTCGTCTTTTCACTCGCACGAACCCATCATCTCAGATCCACATTCAATCGTCGGTTCAAACCCCGGAACCGCTCTTGGCGTCGGAGTTGGTGTCGGGCTTTTTCCTCTCCTAGCAACTGCTCCTTGCCTAGCTCCGTCCAACGTCGGTGGAGCTGAAGATCAAAATATCGGTCATCGAATTAGAGGCGGAGGAATCCAACTATGGCACAATCAACAGCCGAACCACGATAATTACTTAAGGAAACCATCAATTGATAACCATAGCTCTGGAAATTCTGAAAATGGCGGAGCTATCGGGTCTGCGGCCACCTGTCAAGACTGTGGAAACCAAGCGAAAAAAGATTGCAGCCACAGACGGTGTAGAACCTGCTGCAAAAGCCGCGGTTTTGACTGTTCAACTCACGTTAAGAGCACATGGGTTCCGGCGGCTCGGCGGAGGGAGCGGCAGATGATAACCGCCGGTTCATCTGGGTCAACTTCCGGTGCAAAAAAACCAAGACTCGTTACTTCACAGACCACGACCAACTCCCATACTTCCGCCTCATACACCACTCCTCCGAGAAGCTATGAAACCACCTCTAGCCACCCTGCCGATGGAGCAAAGGAGGCGCTACCGGGGCAAGTACGTGCGACGGCGGTGTTCAAGTGCGTGAGAGTGACCGCCGTGGACGACGAAGAAGACGAATACGCATACCAAGCCGTGGTAAGAATCGGAGGACACGTTTTCAAAGGGTTTCTGTACGATCAAGGAGCTGAATCAAGAGAAGTTTTTCCAAATATTTCAGAACTCCATTTAAATGGAGCTGCAGGCAATGGCAAAAATGGAGCTTCTTCTACGTCTCCTCTCCTCCATCCTTCCGATATCTTTGGAACCTCTGGTTCAGCCGCTGCTGCTACTGCATTTCTTGGTGGTTCAAGCTATGGTAATGGCGTTTAA 975 51.28 MLGLRDLFVVAPASSFHSHEPIISDPHSIVGSNPGTALGVGVGVGLFPLLATAPCLAPSNVGGAEDQNIGHRIRGGGIQLWHNQQPNHDNYLRKPSIDNHSSGNSENGGAIGSAATCQDCGNQAKKDCSHRRCRTCCKSRGFDCSTHVKSTWVPAARRRERQMITAGSSGSTSGAKKPRLVTSQTTTNSHTSASYTTPPRSYETTSSHPADGAKEALPGQVRATAVFKCVRVTAVDDEEDEYAYQAVVRIGGHVFKGFLYDQGAESREVFPNISELHLNGAAGNGKNGASSTSPLLHPSDIFGTSGSAAAATAFLGGSSYGNGV 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8388277 8389332 - Bma011224.1 Bma14g00754 94735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00754 324 MobiDBLite consensus disorder prediction 164 208 - -
Bma14g00754 324 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 322 IPR007818 GO:0003700|GO:0006355
Bma14g00754 324 Pfam Domain of unknown function (DUF702) 115 265 - -
Bma14g00754 324 MobiDBLite consensus disorder prediction 164 215 - -
Bma14g00754 324 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 322 - -
Bma14g00754 324 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 217 263 IPR006511 -
Bma14g00754 324 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 116 158 IPR006510 -
Bma14g00754 324 MobiDBLite consensus disorder prediction 82 107 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00281 Bma14g00754 CCT
Bma11g00303 Bma14g00754 CCT
Bma07g01484 Bma14g00754 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00096 Bma-Chr9:2564937 Bma14g00754 Bma-Chr14:8388277 3.95E-45 dispersed
Bma11g00303 Bma-Chr11:2862855 Bma14g00754 Bma-Chr14:8388277 3.55E-137 dispersed
Bma14g00754 Bma-Chr14:8388277 Bma15g00973 Bma-Chr15:37616023 4.76E-46 dispersed
Bma03g00436 Bma-Chr3:3341899 Bma14g00754 Bma-Chr14:8388277 2.35E-64 transposed
Bma14g00754 Bma-Chr14:8388277 Bma07g00281 Bma-Chr7:3479871 2.40E-95 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58337 PF05142 DUF702 1.30E-59 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00754 - - vri:117916582 443.736