Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma14g00768 | ATGGCTGAAACTCCGAGGAGGAGCCTCCGATCACCTAGCAAAAACAATCTATCGCCGCTTTCTAATCAGAAACTCGCTTCTTCAATCGCGAGCCCACAAGCCCTAACTCCTTCAAGGTCGACGCGACGGAATTCAGTTGGACTAGACTCGATTAGGAAGAATTGCGATGAAGAAACTGAGAAGTCCTTGGGAGTTTCTGTCAAAAGACGAAGAGATGCTAAATTTATGGAGGGATTCGAGCCCAAGACGCCTCGTAGATCTATTCGATTTGGTGGAGACATTAGAGAAGATTGTGAAGAAACTTCTGGTAATGGGACAAATAATGGAGTTAGAAAACAGCGGGAAACTGAGATAAGTGATGAACAAGCGAAAACCCCAAAATCCGCAAAAGTACGTCAGAATGTGAAGCATAGAGAGGGGACCAATTCTTTGGAAGATACGTTCTCTCCAGTGTCACCCGAACAAACGGAGACAAAGAAGAGGAGATGCAATGACAGAACAGTGGCTAAAAGAGCTTTGGCTTCAAAAAATATAATTTCTGGCAAAAATAAAAAGAGTGATTTGGGATCGAAGAGACGCGTGTACTATAAAAAAGTAGTCTACGACGGAGGAGAATTTGAAGTGAAAGACGATGTATATGTGAAGAAGATAGAGGACGGGAGGTCCGATGATGAAGAACCCCAAATGGAAGAATGTAGAATATGCTTCACATCTGGAAAGGCTGTAATGATTGAGTGCGATGATTGTTTAGGTGGGTTCCATTTGAAATGCTTGAAGCCGCCTTTGAAGGAGATTCCTGAGGGGGATTGGATATGTGAATTTTGTCAGGCTCGCAAAATGGGTAAAAATGTGGTGCTTCCAAAACCTCCCAAAGGAAAAAAACTGTGCAGGACGATGAGAGAGAAGCTCCTATCTGGTGATCTGTGGGCTGCTCGCATTGAAAATTTATGGAAGGAAGCTGACAGTAGCTATTGGTGCCGAGTTCGTTGGTATATAATCCCGGATGAGACTTCAGCGGGAAGGCAACCACATAACTTGAGCAGGGAGCTTTATCTCACGAATGATTTTGCTGAAATTGAGATGGAAACCATCATTCGACAGTGTAATGTCATGAGCCCAAAAGAATATGCCAGGGCAAAAAATGAAGGGGATGACGTCTTCTTATGCGAGTATGAGTATGACATTCGTTGGCACAGTTTCAGGCGCATTGCTGACATAGATGATGTTGAAGAGGATGGAGAAGCAACTAACAGTGATGAAGATTGGAATTTTAGCAATGATTCAGACTCTGATAGAGATGAAGAATTAGAGTATGAAGAAGAGACTGAGAATAAGTTGCGAGCCAGATCATCCTTAGCTCAAGATTCAGCTGCAAATTCAAGGAAGGGTAAATTTTTTGGACTTCAAAAGATAGGGGTGAAGAAGATCCCAGAGCATGTGAGATGCCACAAGCAAAGTGAACTCGAAAAGGCTAAGGCAGCACTTACTTTGGCATCATTACCGAAGTCTCTACCTTGCAGGAATAAAGAAATGGAGGAAATAACTGCATTTATAAAAGGTGCGATTAGTGATGGTAAATGTTTGGGGCGTTGCCTTTATATCCATGGTGTTCCTGGAACTGGCAAGACGATGACTGTACTTGCGGTATTGAGAAATCTAAAGGGTGAAGTTGATTCTGGAAGTATAAGAGCTCACTGTTTTGTGGAGGTTAATGTTCTAAAGCTGGCATCACCAGAAAACATATATAGGGTTATATATGAGGCATTAACTGGGCACAGAGTTAGTTGGAAAAAAGCTCTTCATTTGCTGACTGAACGCTTTTCAGACGAAAATAAAGCTGTCAAAGAGGATGAACGACCTTGTGTTCTGCTCATTGATGAGCTTGATCTTCTTGTAACAAGAAATCAGTCGGTTCTGTACAACATTCTCGATTGGCCAACTAAGCCACACTCCAATTTGGTTGTGATAGGGATAGCAAATACTATGGATCTTCCAGAAAAGTTGCTTCCCCGTATTTCAAGTCGCATGGGCATCGAAAGGCTTTGCTTTGGCCCATATAATTATCTGCAGCTTCAAGAAATAATCTCAAGTCGCCTCAAAGGAATTAATGCATTTGAAAAACAAGCTATAGAATTTGCATCAAGGAAGGTAGCAGCTATTTCAGGAGATGCACGACGTGCACTTGAGATTTGCAGGCGCGCAGCGGAAATTGCTGATTACCATTTAAAGTTGACTAAAACTTCTAATGCTGTTTCAGAAGGAAAAGAGCTTGTTGGTATGGCCGAGGTAGAAGCAGCCATTCAAGAAATGTTCCAAGCCCCCCATATTCAAGTGATGAAAAACAGTTCCAAAATGAGTAAAATATTTTTGACAGCTATGGTTCATGAACTCTATAAGTCTGGAATGAGCGAAACCACCTTTGAAAAGCTGGTAATGGTTATTTCAAGTCTCTGTACGGGCAATGGAGAAACATTTCCTGGATATGATGCACTGTTGAAAGTTGGTTGTAAGTTGGGCGAATGCAGAATTATTTTATGTGAAGCAGGAGCTAAGCACATGTTGCAAAAATTACAGTTCAATTTTCCAAGTGATGATGTGTCATTTGCGTTAAAGGGCAGCAAGGAGCTTCCATGGCTGGCCAAGTATTTATAA | 2652 | 41.89 | MAETPRRSLRSPSKNNLSPLSNQKLASSIASPQALTPSRSTRRNSVGLDSIRKNCDEETEKSLGVSVKRRRDAKFMEGFEPKTPRRSIRFGGDIREDCEETSGNGTNNGVRKQRETEISDEQAKTPKSAKVRQNVKHREGTNSLEDTFSPVSPEQTETKKRRCNDRTVAKRALASKNIISGKNKKSDLGSKRRVYYKKVVYDGGEFEVKDDVYVKKIEDGRSDDEEPQMEECRICFTSGKAVMIECDDCLGGFHLKCLKPPLKEIPEGDWICEFCQARKMGKNVVLPKPPKGKKLCRTMREKLLSGDLWAARIENLWKEADSSYWCRVRWYIIPDETSAGRQPHNLSRELYLTNDFAEIEMETIIRQCNVMSPKEYARAKNEGDDVFLCEYEYDIRWHSFRRIADIDDVEEDGEATNSDEDWNFSNDSDSDRDEELEYEEETENKLRARSSLAQDSAANSRKGKFFGLQKIGVKKIPEHVRCHKQSELEKAKAALTLASLPKSLPCRNKEMEEITAFIKGAISDGKCLGRCLYIHGVPGTGKTMTVLAVLRNLKGEVDSGSIRAHCFVEVNVLKLASPENIYRVIYEALTGHRVSWKKALHLLTERFSDENKAVKEDERPCVLLIDELDLLVTRNQSVLYNILDWPTKPHSNLVVIGIANTMDLPEKLLPRISSRMGIERLCFGPYNYLQLQEIISSRLKGINAFEKQAIEFASRKVAAISGDARRALEICRRAAEIADYHLKLTKTSNAVSEGKELVGMAEVEAAIQEMFQAPHIQVMKNSSKMSKIFLTAMVHELYKSGMSETTFEKLVMVISSLCTGNGETFPGYDALLKVGCKLGECRIILCEAGAKHMLQKLQFNFPSDDVSFALKGSKELPWLAKYL | 883 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 8502750 | 8509627 | - | Bma011238.1 | Bma14g00768 | 94749 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma14g00768 | 883 | SMART | BAH_4 | 263 | 404 | IPR001025 | GO:0003682 | |
Bma14g00768 | 883 | MobiDBLite | consensus disorder prediction | 49 | 100 | - | - | |
Bma14g00768 | 883 | Pfam | PHD-finger | 232 | 277 | IPR019787 | - | |
Bma14g00768 | 883 | Gene3D | - | 484 | 684 | IPR027417 | - | |
Bma14g00768 | 883 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 223 | 288 | IPR013083 | - | |
Bma14g00768 | 883 | Pfam | BAH domain | 311 | 400 | IPR001025 | GO:0003682 | |
Bma14g00768 | 883 | MobiDBLite | consensus disorder prediction | 113 | 143 | - | - | |
Bma14g00768 | 883 | Pfam | ATPase family associated with various cellular activities (AAA) | 533 | 679 | IPR003959 | GO:0005524|GO:0016887 | |
Bma14g00768 | 883 | ProSiteProfiles | BAH domain profile. | 276 | 404 | IPR001025 | GO:0003682 | |
Bma14g00768 | 883 | MobiDBLite | consensus disorder prediction | 1 | 164 | - | - | |
Bma14g00768 | 883 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 494 | 741 | IPR027417 | - | |
Bma14g00768 | 883 | MobiDBLite | consensus disorder prediction | 411 | 440 | - | - | |
Bma14g00768 | 883 | ProSitePatterns | Zinc finger PHD-type signature. | 232 | 275 | IPR019786 | - | |
Bma14g00768 | 883 | SUPERFAMILY | BAH domain | 347 | 410 | - | - | |
Bma14g00768 | 883 | CDD | AAA | 509 | 685 | - | - | |
Bma14g00768 | 883 | PANTHER | CELL DIVISION CONTROL PROTEIN 6-RELATED | 188 | 879 | - | - | |
Bma14g00768 | 883 | SMART | AAA_5 | 528 | 682 | IPR003593 | - | |
Bma14g00768 | 883 | Gene3D | - | 174 | 421 | IPR043151 | - | |
Bma14g00768 | 883 | MobiDBLite | consensus disorder prediction | 411 | 455 | - | - | |
Bma14g00768 | 883 | Pfam | AAA lid domain | 705 | 742 | IPR041083 | - | |
Bma14g00768 | 883 | SUPERFAMILY | FYVE/PHD zinc finger | 218 | 282 | IPR011011 | - | |
Bma14g00768 | 883 | PANTHER | ORIGIN RECOGNITION COMPLEX SUBUNIT 1 | 188 | 879 | IPR020793 | - | |
Bma14g00768 | 883 | Gene3D | - | 685 | 773 | - | - | |
Bma14g00768 | 883 | ProSiteProfiles | Zinc finger PHD-type profile. | 229 | 278 | IPR019787 | - | |
Bma14g00768 | 883 | MobiDBLite | consensus disorder prediction | 8 | 48 | - | - | |
Bma14g00768 | 883 | SMART | PHD_3 | 231 | 276 | IPR001965 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma11g00017 | Bma-Chr11:435658 | Bma14g00768 | Bma-Chr14:8502750 | 2.00E-08 | dispersed | |
Bma11g00084 | Bma-Chr11:960515 | Bma14g00768 | Bma-Chr14:8502750 | 1.15E-30 | dispersed | |
Bma14g00768 | Bma-Chr14:8502750 | Bma03g00692 | Bma-Chr3:5810630 | 1.76E-08 | dispersed | |
Bma14g00768 | Bma-Chr14:8502750 | Bma03g00563 | Bma-Chr3:4679396 | 3.03E-09 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
58339 | PF00004 | AAA | 1.60E-19 | CL0023 | Bma | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma14g00768 | K02603 | - | zju:107412606 | 1163.67 |