Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00768 ATGGCTGAAACTCCGAGGAGGAGCCTCCGATCACCTAGCAAAAACAATCTATCGCCGCTTTCTAATCAGAAACTCGCTTCTTCAATCGCGAGCCCACAAGCCCTAACTCCTTCAAGGTCGACGCGACGGAATTCAGTTGGACTAGACTCGATTAGGAAGAATTGCGATGAAGAAACTGAGAAGTCCTTGGGAGTTTCTGTCAAAAGACGAAGAGATGCTAAATTTATGGAGGGATTCGAGCCCAAGACGCCTCGTAGATCTATTCGATTTGGTGGAGACATTAGAGAAGATTGTGAAGAAACTTCTGGTAATGGGACAAATAATGGAGTTAGAAAACAGCGGGAAACTGAGATAAGTGATGAACAAGCGAAAACCCCAAAATCCGCAAAAGTACGTCAGAATGTGAAGCATAGAGAGGGGACCAATTCTTTGGAAGATACGTTCTCTCCAGTGTCACCCGAACAAACGGAGACAAAGAAGAGGAGATGCAATGACAGAACAGTGGCTAAAAGAGCTTTGGCTTCAAAAAATATAATTTCTGGCAAAAATAAAAAGAGTGATTTGGGATCGAAGAGACGCGTGTACTATAAAAAAGTAGTCTACGACGGAGGAGAATTTGAAGTGAAAGACGATGTATATGTGAAGAAGATAGAGGACGGGAGGTCCGATGATGAAGAACCCCAAATGGAAGAATGTAGAATATGCTTCACATCTGGAAAGGCTGTAATGATTGAGTGCGATGATTGTTTAGGTGGGTTCCATTTGAAATGCTTGAAGCCGCCTTTGAAGGAGATTCCTGAGGGGGATTGGATATGTGAATTTTGTCAGGCTCGCAAAATGGGTAAAAATGTGGTGCTTCCAAAACCTCCCAAAGGAAAAAAACTGTGCAGGACGATGAGAGAGAAGCTCCTATCTGGTGATCTGTGGGCTGCTCGCATTGAAAATTTATGGAAGGAAGCTGACAGTAGCTATTGGTGCCGAGTTCGTTGGTATATAATCCCGGATGAGACTTCAGCGGGAAGGCAACCACATAACTTGAGCAGGGAGCTTTATCTCACGAATGATTTTGCTGAAATTGAGATGGAAACCATCATTCGACAGTGTAATGTCATGAGCCCAAAAGAATATGCCAGGGCAAAAAATGAAGGGGATGACGTCTTCTTATGCGAGTATGAGTATGACATTCGTTGGCACAGTTTCAGGCGCATTGCTGACATAGATGATGTTGAAGAGGATGGAGAAGCAACTAACAGTGATGAAGATTGGAATTTTAGCAATGATTCAGACTCTGATAGAGATGAAGAATTAGAGTATGAAGAAGAGACTGAGAATAAGTTGCGAGCCAGATCATCCTTAGCTCAAGATTCAGCTGCAAATTCAAGGAAGGGTAAATTTTTTGGACTTCAAAAGATAGGGGTGAAGAAGATCCCAGAGCATGTGAGATGCCACAAGCAAAGTGAACTCGAAAAGGCTAAGGCAGCACTTACTTTGGCATCATTACCGAAGTCTCTACCTTGCAGGAATAAAGAAATGGAGGAAATAACTGCATTTATAAAAGGTGCGATTAGTGATGGTAAATGTTTGGGGCGTTGCCTTTATATCCATGGTGTTCCTGGAACTGGCAAGACGATGACTGTACTTGCGGTATTGAGAAATCTAAAGGGTGAAGTTGATTCTGGAAGTATAAGAGCTCACTGTTTTGTGGAGGTTAATGTTCTAAAGCTGGCATCACCAGAAAACATATATAGGGTTATATATGAGGCATTAACTGGGCACAGAGTTAGTTGGAAAAAAGCTCTTCATTTGCTGACTGAACGCTTTTCAGACGAAAATAAAGCTGTCAAAGAGGATGAACGACCTTGTGTTCTGCTCATTGATGAGCTTGATCTTCTTGTAACAAGAAATCAGTCGGTTCTGTACAACATTCTCGATTGGCCAACTAAGCCACACTCCAATTTGGTTGTGATAGGGATAGCAAATACTATGGATCTTCCAGAAAAGTTGCTTCCCCGTATTTCAAGTCGCATGGGCATCGAAAGGCTTTGCTTTGGCCCATATAATTATCTGCAGCTTCAAGAAATAATCTCAAGTCGCCTCAAAGGAATTAATGCATTTGAAAAACAAGCTATAGAATTTGCATCAAGGAAGGTAGCAGCTATTTCAGGAGATGCACGACGTGCACTTGAGATTTGCAGGCGCGCAGCGGAAATTGCTGATTACCATTTAAAGTTGACTAAAACTTCTAATGCTGTTTCAGAAGGAAAAGAGCTTGTTGGTATGGCCGAGGTAGAAGCAGCCATTCAAGAAATGTTCCAAGCCCCCCATATTCAAGTGATGAAAAACAGTTCCAAAATGAGTAAAATATTTTTGACAGCTATGGTTCATGAACTCTATAAGTCTGGAATGAGCGAAACCACCTTTGAAAAGCTGGTAATGGTTATTTCAAGTCTCTGTACGGGCAATGGAGAAACATTTCCTGGATATGATGCACTGTTGAAAGTTGGTTGTAAGTTGGGCGAATGCAGAATTATTTTATGTGAAGCAGGAGCTAAGCACATGTTGCAAAAATTACAGTTCAATTTTCCAAGTGATGATGTGTCATTTGCGTTAAAGGGCAGCAAGGAGCTTCCATGGCTGGCCAAGTATTTATAA 2652 41.89 MAETPRRSLRSPSKNNLSPLSNQKLASSIASPQALTPSRSTRRNSVGLDSIRKNCDEETEKSLGVSVKRRRDAKFMEGFEPKTPRRSIRFGGDIREDCEETSGNGTNNGVRKQRETEISDEQAKTPKSAKVRQNVKHREGTNSLEDTFSPVSPEQTETKKRRCNDRTVAKRALASKNIISGKNKKSDLGSKRRVYYKKVVYDGGEFEVKDDVYVKKIEDGRSDDEEPQMEECRICFTSGKAVMIECDDCLGGFHLKCLKPPLKEIPEGDWICEFCQARKMGKNVVLPKPPKGKKLCRTMREKLLSGDLWAARIENLWKEADSSYWCRVRWYIIPDETSAGRQPHNLSRELYLTNDFAEIEMETIIRQCNVMSPKEYARAKNEGDDVFLCEYEYDIRWHSFRRIADIDDVEEDGEATNSDEDWNFSNDSDSDRDEELEYEEETENKLRARSSLAQDSAANSRKGKFFGLQKIGVKKIPEHVRCHKQSELEKAKAALTLASLPKSLPCRNKEMEEITAFIKGAISDGKCLGRCLYIHGVPGTGKTMTVLAVLRNLKGEVDSGSIRAHCFVEVNVLKLASPENIYRVIYEALTGHRVSWKKALHLLTERFSDENKAVKEDERPCVLLIDELDLLVTRNQSVLYNILDWPTKPHSNLVVIGIANTMDLPEKLLPRISSRMGIERLCFGPYNYLQLQEIISSRLKGINAFEKQAIEFASRKVAAISGDARRALEICRRAAEIADYHLKLTKTSNAVSEGKELVGMAEVEAAIQEMFQAPHIQVMKNSSKMSKIFLTAMVHELYKSGMSETTFEKLVMVISSLCTGNGETFPGYDALLKVGCKLGECRIILCEAGAKHMLQKLQFNFPSDDVSFALKGSKELPWLAKYL 883
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8502750 8509627 - Bma011238.1 Bma14g00768 94749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00768 883 SMART BAH_4 263 404 IPR001025 GO:0003682
Bma14g00768 883 MobiDBLite consensus disorder prediction 49 100 - -
Bma14g00768 883 Pfam PHD-finger 232 277 IPR019787 -
Bma14g00768 883 Gene3D - 484 684 IPR027417 -
Bma14g00768 883 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 223 288 IPR013083 -
Bma14g00768 883 Pfam BAH domain 311 400 IPR001025 GO:0003682
Bma14g00768 883 MobiDBLite consensus disorder prediction 113 143 - -
Bma14g00768 883 Pfam ATPase family associated with various cellular activities (AAA) 533 679 IPR003959 GO:0005524|GO:0016887
Bma14g00768 883 ProSiteProfiles BAH domain profile. 276 404 IPR001025 GO:0003682
Bma14g00768 883 MobiDBLite consensus disorder prediction 1 164 - -
Bma14g00768 883 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 494 741 IPR027417 -
Bma14g00768 883 MobiDBLite consensus disorder prediction 411 440 - -
Bma14g00768 883 ProSitePatterns Zinc finger PHD-type signature. 232 275 IPR019786 -
Bma14g00768 883 SUPERFAMILY BAH domain 347 410 - -
Bma14g00768 883 CDD AAA 509 685 - -
Bma14g00768 883 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 188 879 - -
Bma14g00768 883 SMART AAA_5 528 682 IPR003593 -
Bma14g00768 883 Gene3D - 174 421 IPR043151 -
Bma14g00768 883 MobiDBLite consensus disorder prediction 411 455 - -
Bma14g00768 883 Pfam AAA lid domain 705 742 IPR041083 -
Bma14g00768 883 SUPERFAMILY FYVE/PHD zinc finger 218 282 IPR011011 -
Bma14g00768 883 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 1 188 879 IPR020793 -
Bma14g00768 883 Gene3D - 685 773 - -
Bma14g00768 883 ProSiteProfiles Zinc finger PHD-type profile. 229 278 IPR019787 -
Bma14g00768 883 MobiDBLite consensus disorder prediction 8 48 - -
Bma14g00768 883 SMART PHD_3 231 276 IPR001965 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00017 Bma-Chr11:435658 Bma14g00768 Bma-Chr14:8502750 2.00E-08 dispersed
Bma11g00084 Bma-Chr11:960515 Bma14g00768 Bma-Chr14:8502750 1.15E-30 dispersed
Bma14g00768 Bma-Chr14:8502750 Bma03g00692 Bma-Chr3:5810630 1.76E-08 dispersed
Bma14g00768 Bma-Chr14:8502750 Bma03g00563 Bma-Chr3:4679396 3.03E-09 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58339 PF00004 AAA 1.60E-19 CL0023 Bma TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00768 K02603 - zju:107412606 1163.67