Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00770 ATGAAAAGAGTTGAAGTCATGCAGTCCAAATCTGAAACCAAAGATAGAGTAGAACCTCATGCACATAACATCCAACCACCCTATAGTTACTTTGAACCTTGGTGGCGTACTGTGGAATACAATTCTATTCCCCGACCTGTAGCAGGGAACACAACCAACTCACCTTCAATTGAGTCCATTGATGACCAATCAATCTCTAATGATGAGCAAAATGAGGACAATGATACTGAAAAACAATCACATAGACTGATTGGATCTCCACGTGCTGGTGGAAAAGGTCAGCAAGATGCTCCAAGTGGGTCAAATGGGGGATCCTCCACAACCACAATGCATGGTGCATATATGGAACAACCTCCATTGCTTGAACTAATTGGACATTCTACTGATCCATATTACGGAGGAGTGATGACTGCTTATGGGGATCAGCCTATGGGTTATAATCCTTTTCTGGGAATGCCGCATGCTAGAATGCCTTTACCTCGCGACATCATACAAGAGCCAGTTTTAGTGAATGCTAAGCAATACCAAGGGATTTTGAGGAGAAGACAAGCTCGTGCTAAAGCAGAAGTTGAAAAGAAGCTGATGAAAAATAAAAAGCCATATCTTCATGAATCTCGTCATAAGCATGCAATGAGAAGAGAAAGAAGCATGGGCGGACGTTTTGCCAAGAAAATGGAGGGCAATTCTGTCAACTGCTTTGGTAAAGAAACGGCATCAGATTCTGCTCCATCCAGGTCATCGCAGTCAGCTTGTACATCTGCTTCTGAACTCTTAGCTACAGTTGTGAGTGAAACACAGACTTCCATCAATGGTCAAGAAGCAAGAAGCTGGCCCCACTAG 840 43.33 MKRVEVMQSKSETKDRVEPHAHNIQPPYSYFEPWWRTVEYNSIPRPVAGNTTNSPSIESIDDQSISNDEQNEDNDTEKQSHRLIGSPRAGGKGQQDAPSGSNGGSSTTTMHGAYMEQPPLLELIGHSTDPYYGGVMTAYGDQPMGYNPFLGMPHARMPLPRDIIQEPVLVNAKQYQGILRRRQARAKAEVEKKLMKNKKPYLHESRHKHAMRRERSMGGRFAKKMEGNSVNCFGKETASDSAPSRSSQSACTSASELLATVVSETQTSINGQEARSWPH 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8563570 8565812 - Bma011240.4 Bma14g00770 94751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00770 279 ProSiteProfiles NF-YA/HAP2 family profile. 164 224 IPR001289 GO:0003700|GO:0006355
Bma14g00770 279 PRINTS CCAAT-binding transcription factor subunit B signature 167 189 IPR001289 GO:0003700|GO:0006355
Bma14g00770 279 PRINTS CCAAT-binding transcription factor subunit B signature 198 221 IPR001289 GO:0003700|GO:0006355
Bma14g00770 279 MobiDBLite consensus disorder prediction 234 255 - -
Bma14g00770 279 Gene3D - 164 226 - -
Bma14g00770 279 MobiDBLite consensus disorder prediction 44 112 - -
Bma14g00770 279 SMART cbf3 163 224 IPR001289 GO:0003700|GO:0006355
Bma14g00770 279 MobiDBLite consensus disorder prediction 1 21 - -
Bma14g00770 279 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 166 221 IPR001289 GO:0003700|GO:0006355
Bma14g00770 279 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9 50 272 - -
Bma14g00770 279 MobiDBLite consensus disorder prediction 1 27 - -
Bma14g00770 279 MobiDBLite consensus disorder prediction 95 112 - -
Bma14g00770 279 MobiDBLite consensus disorder prediction 44 64 - -
Bma14g00770 279 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 50 272 IPR001289 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma11g00292 Bma14g00770 CCT
Bma07g00265 Bma14g00770 CCT
Bma11g00292 Bma14g00770 ECH
Bma07g00265 Bma14g00770 ECH
Bma07g01396 Bma14g00770 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00292 Bma-Chr11:2745528 Bma14g00770 Bma-Chr14:8563570 3.04E-71 dispersed
Bma11g00443 Bma-Chr11:5011590 Bma14g00770 Bma-Chr14:8563570 4.85E-33 dispersed
Bma14g00770 Bma-Chr14:8563570 Bma07g01396 Bma-Chr7:49752772 1.46E-99 wgd
Bma14g00770 Bma-Chr14:8563570 Bma07g00265 Bma-Chr7:3247422 4.36E-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58340 PF02045 CBFB_NFYA 2.40E-25 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00770 K08064 - mnt:21398404 270.396