Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00780 AAGGGAACTATGAATGCAAATGATTGGCTTTCTTTCCCATTTTCACCAACTCAAACTTCTCAGTCCCATCAATTCTCCCTAGGGCTAGTGAATGATCCAATGGAAAACCCATGTATCAGCCAGGATTGGAATTTGATTACTAACCAAGGAGGAAATGAAGTTCCTAAAGTGGCTGATTTTCTTGGGGTTACCAATTCAGATAGTCAATCAGATCTATCTGTTTTTAATGGGATGCAGTCGAATGATTCAGAGTATTTATATTCAAACAACAGCATAGTTCCTCTTCAAACCACCATGGCTGATTTCCAAGAAAGCTCTAACGACTTGCAGTCCTTGACTTTGTCGATGGGAAGTGGAAACAAGGCTTCGACAACATGTGAAAATAGTGGTGAAAACAGCATAATCAGTACTGTCGAGGCAACTCCAAGAAGAACTATGGAGACTTTTGGGCAAAGAACTTCAATTTATCGTGGGGTTACAAGGCATCGATGGACAGGAAGATACGAAGCTCACCTTTGGGATAACAGTTGCAGAAGGGAAGGACAATCAAGAAAGGGTCGTCAAGGTGGGTATGACAAAGAAGATAAAGCAGCTAGGGCTTATGATCTTGCAGCATTGAAATATTGGGGAACATCAACGACTACGAACTTTCCTGAAAGCGATTATGAAAGAGAATTGGAGGAGATGAAGAGCATGACAAGACAAGAATTCGTGGCCTCCATTAGAAGGAAGAGTAGTGGGTTTTCTAGAGGTGCATCCATGCATCATCAACATGGAAAATGGCAGGCAAGAATCGGAAGAGTTGCAGGAAATAAAGATCTTTACTTGGGAACATTCAGTACCGAGGAAGAAGCCGCGGAAGCATACGACATTGCAGCCATAAAATTCCGAGGCCAAACTGCAGTGACAAACTTCGACATGAATCGATACGACGTAAAAACCATTTTAGAAAGCAACTCTCTACCCATCGGAGGAGGAGCAGCAAAAAGATTGAAAGAAGCTCAGGTCATTGAATCGGCGAGAGAACGCGAAGAAATGATGGCTCTAGCTTCTCGCTTTCACTATGGTGCCTCTGGTGAATCTTCTGCTGGGGTTCCTCTGCAATCTTTTGAGCAATATTTTCCGTTGATTTATCAGCAAAATCGAGAAATGTCTCATTTTCCTCAAGACCCATCATCGTTTCATCAGAGTTATTTTCATCAACTTCACTTTCCTCATCAGAATTCTGGTTTTCAGGCTAACCTATTAAGCCAAAACCCTCAGTTCTTCGATGGGCATAATTCTGGATCATCTTCTTCGTCTGTAATCATGGAGAATAACACTGGAGGAGGACTATATAACCTAAGAAATGGAGGTTGGTCCGCTGATCATCAGACTAACAACGGGGTTTTCAGTTCGTGGAACGAAGGTTGA 1413 42.32 KGTMNANDWLSFPFSPTQTSQSHQFSLGLVNDPMENPCISQDWNLITNQGGNEVPKVADFLGVTNSDSQSDLSVFNGMQSNDSEYLYSNNSIVPLQTTMADFQESSNDLQSLTLSMGSGNKASTTCENSGENSIISTVEATPRRTMETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEDKAARAYDLAALKYWGTSTTTNFPESDYERELEEMKSMTRQEFVASIRRKSSGFSRGASMHHQHGKWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGQTAVTNFDMNRYDVKTILESNSLPIGGGAAKRLKEAQVIESAREREEMMALASRFHYGASGESSAGVPLQSFEQYFPLIYQQNREMSHFPQDPSSFHQSYFHQLHFPHQNSGFQANLLSQNPQFFDGHNSGSSSSSVIMENNTGGGLYNLRNGGWSADHQTNNGVFSSWNEG 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8728576 8731344 + Bma011250.1 Bma14g00780 94761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00780 470 CDD AP2 250 306 IPR001471 GO:0003700|GO:0006355
Bma14g00780 470 Gene3D AP2/ERF domain 155 219 IPR036955 GO:0003700|GO:0006355
Bma14g00780 470 Gene3D AP2/ERF domain 250 308 IPR036955 GO:0003700|GO:0006355
Bma14g00780 470 PRINTS Ethylene responsive element binding protein signature 156 167 IPR001471 GO:0003700|GO:0006355
Bma14g00780 470 PRINTS Ethylene responsive element binding protein signature 288 308 IPR001471 GO:0003700|GO:0006355
Bma14g00780 470 ProSiteProfiles AP2/ERF domain profile. 155 218 IPR001471 GO:0003700|GO:0006355
Bma14g00780 470 ProSiteProfiles AP2/ERF domain profile. 248 306 IPR001471 GO:0003700|GO:0006355
Bma14g00780 470 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 8 447 - -
Bma14g00780 470 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 8 447 - -
Bma14g00780 470 CDD AP2 154 220 IPR001471 GO:0003700|GO:0006355
Bma14g00780 470 SUPERFAMILY DNA-binding domain 250 307 IPR016177 GO:0003677
Bma14g00780 470 SMART rav1_2 155 224 IPR001471 GO:0003700|GO:0006355
Bma14g00780 470 SMART rav1_2 250 312 IPR001471 GO:0003700|GO:0006355
Bma14g00780 470 SUPERFAMILY DNA-binding domain 154 219 IPR016177 GO:0003677
Bma14g00780 470 Pfam AP2 domain 155 210 IPR001471 GO:0003700|GO:0006355
Bma14g00780 470 Pfam AP2 domain 255 298 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g01409 Bma14g00780 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01412 Bma-Chr7:49890601 Bma14g00780 Bma-Chr14:8728576 0 dispersed
Bma14g00780 Bma-Chr14:8728576 Bma14g01163 Bma-Chr14:16921957 9.71E-120 dispersed
Bma14g00780 Bma-Chr14:8728576 Bma07g01409 Bma-Chr7:49858960 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58341 PF00847 AP2 1.30E-08 CL0081 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00780 K09285 - pvy:116115844 595.504