Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00784 ATGGAGAGCCTGATGATGGTCGAGGAAACATTGGGTGACGGTTCAGATTTAGATGTTGACGACATAAGATCTGAAAACATTGAGGACAAAGATGTCAGTGATGAAGAAATCGAAGCAGAAGAATTGGAGAGACGGATGTGGAAGGATCGTATTAAACTCAAAAGGATCAAGGAGAAGCAAAAGCTTGCAGCCCAACAAGCTGCTGAAAAGCTAAAGCCTAAGCAAGCCACTGACCAGGCTCGTAGAAAGAAAATGTCTCGAGCTCAAGATGGGATCCTCAAGTATATGTTGAAGCTGATGGAAGTGTGCAAGGCTCGTGGATTCGTGTATGGTATAATTCCAGAGAAGGGAAAAGCAGTTAGCGGTTCTTCCGATAACATTAGAGCTTGGTGGAAAGAAAAGGTTAAATTTGACAAAAATGGCCCAGCAGCCATAGCCAAGTATGAAACCGATTGTCTTGCAAGAGGAGAAGCAGATAACAGCGGAAATGGAAACTCGCAGAGTATTCTCCAAGATCTACAAGATGCAACTCTAGGCTCTCTTTTATCTTCCTTGATGCAACATTGTGACCCCCCTCAGCGGAAGTACCCTTTAGAAAAGCAAGTTCCACCGCCATGGTGGCCAAACGGGAACGAAGATTGGTGGGTTAAAATCGGTCTACCCCATGGCCAGAGTCCTCCGTATAAAAAGCCTCACGATTTGAAGAAAATATGGAAAGTTGGTGTTTTGACGGCTGTGATAAAGCATATGTCACCCAATATTGCAAAAATTAGGAGACATGTTCGACAGTCGAAGTGCTTGCAAGACAAGATGACGGCAAAGGAGAGTGCAATTTGGTTGGGGGTTTTGAAACGAGAGGAATCGCTCATTCGGCAGCCGAGCAGTGACAATGGGATGTCTGGAATCACAGAAACTCCTGCAGGAGGATGTGGTGATAAGCAAGTGGCAGCAATCAGTGGAAGTGATTATGATGTCGATGGTGTGGATGACTGCATGGCTTCAGTGTCGTCCAAAGACGAGAGGAGAAATCGGTTGATCGATGCTCAACCGTCGAGCTGTCTACCCATAACCACTTCTTATCCTGTGGAAGAAGAATATCAAGCCGGAAAGAAATCTCGAACAGGAACAAAAAGGGCTCGTACACAAGCAAATTCTCAGCCATTGACATCCGAAAACAAGCAACTAAATGTTGAGCCAAGAACCATCCTACCCGATATAAATAACTCAGATTTTCCATTGGTGGGATTCGAGATTCCGGGAGTTCAGCTGGCAAGAGAGGCAGCCACTACAACTTTGAGGTCGCTTGAAAGGGATTCAACCTCCCAACCTCAACCACCAGATTTAGAATACAACCATTTCTCTTCGGTACCATCGGAAAATGTTTCTACGCAAAATATATACGACGGTGGAAGGAACTTGACATATTCCTTGACGCAAAATTTGGAGACGAATCACGGAAATATGTACAATTTCTGTAGTCCAACAGTGGAGTATAGGCCTAGTCACTATGGGCAGCAACCTCATATTACTACTCAAATTGTGCCAGAGGATGAGGGATGCAGTATACCTTCTCTACATAGTAATCCAAACGAGATCACTGAAGCAGATTTCAATTATTACGCAAAAGGCCCGTTGCTGGGCGAACAAAATAGGCCTGGTAATGCACAGTTTGGATCTCCGGGCCACAACTTATCGTTAGATTATGGAGCGTTAAACAGTCCATTCGACCTCGGGATTGACGGGATGGGGTCGTTTGATGATCTTTTACTTGACGATGATTTGATTCAATACTTCGGAGCATAG 1803 44.7 MESLMMVEETLGDGSDLDVDDIRSENIEDKDVSDEEIEAEELERRMWKDRIKLKRIKEKQKLAAQQAAEKLKPKQATDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKAVSGSSDNIRAWWKEKVKFDKNGPAAIAKYETDCLARGEADNSGNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKQVPPPWWPNGNEDWWVKIGLPHGQSPPYKKPHDLKKIWKVGVLTAVIKHMSPNIAKIRRHVRQSKCLQDKMTAKESAIWLGVLKREESLIRQPSSDNGMSGITETPAGGCGDKQVAAISGSDYDVDGVDDCMASVSSKDERRNRLIDAQPSSCLPITTSYPVEEEYQAGKKSRTGTKRARTQANSQPLTSENKQLNVEPRTILPDINNSDFPLVGFEIPGVQLAREAATTTLRSLERDSTSQPQPPDLEYNHFSSVPSENVSTQNIYDGGRNLTYSLTQNLETNHGNMYNFCSPTVEYRPSHYGQQPHITTQIVPEDEGCSIPSLHSNPNEITEADFNYYAKGPLLGEQNRPGNAQFGSPGHNLSLDYGALNSPFDLGIDGMGSFDDLLLDDDLIQYFGA 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8747331 8749133 - Bma011255.1 Bma14g00784 94765

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00784 600 MobiDBLite consensus disorder prediction 364 390 - -
Bma14g00784 600 Coils Coil 39 59 - -
Bma14g00784 600 SUPERFAMILY DNA-binding domain of EIN3-like 168 290 IPR023278 GO:0003700|GO:0005634
Bma14g00784 600 PANTHER ETHYLENE INSENSITIVE 3-LIKE 3 PROTEIN 1 599 - -
Bma14g00784 600 Pfam Ethylene insensitive 3 40 287 IPR006957 GO:0005634
Bma14g00784 600 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 599 IPR006957 GO:0005634
Bma14g00784 600 MobiDBLite consensus disorder prediction 432 455 - -
Bma14g00784 600 MobiDBLite consensus disorder prediction 64 84 - -
Bma14g00784 600 MobiDBLite consensus disorder prediction 16 30 - -
Bma14g00784 600 Gene3D - 74 150 IPR023278 GO:0003700|GO:0005634
Bma14g00784 600 Gene3D - 159 298 IPR023278 GO:0003700|GO:0005634
Bma14g00784 600 MobiDBLite consensus disorder prediction 1 34 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00784 K14514 EIN3; ethylene-insensitive protein 3 - qsu:112002894 750.355
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g01187 Bma-Chr8:50764292 Bma14g00784 Bma-Chr14:8747331 1.90E-121 dispersed
Bma14g00784 Bma-Chr14:8747331 Bma14g00810 Bma-Chr14:9026124 2.87E-128 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi6g153 Blo03g00996 . . . . . Bma14g00784 . . Cmo11g00844 . . . . . . . . . . . . . . . . . . . . . . . . . Lsi06g00508 . . . . . Bda07g00734 . . Bpe11g00907 . . . . . Cma11g00834 . . . . Cpe04g00932 . . . . . . . Cla03g01291 Cam03g1360 Cec03g1399 Cco03g1385 Clacu03g1384 Cmu03g1950 Cre03g1623 . Csa01g03142 Chy02g01432 Cme02g00518
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bma14g00810 . 2 613 EIL Transcription Factor Family AT2G27050 60.6 6.7e-193 670.6
Bma08g01187 . 1 481 EIL Transcription Factor Family AT2G27050 56.6 2.6e-144 509.2
Bma14g00784 . 46 365 EIL Transcription Factor Family AT2G27050 56.0 1.6e-93 340.5
Bma14g00784 . 78 328 EIL Transcription Factor Family AT5G21120 52.5 6.2e-73 271.9
Bma14g00784 . 46 576 EIL Transcription Factor Family AT1G73730 51.9 1.9e-136 483.0
Bma14g00810 . 40 333 EIL Transcription Factor Family AT1G73730 62.9 5.0e-105 378.6
Bma08g01187 . 28 323 EIL Transcription Factor Family AT1G73730 56.8 3.3e-96 349.4
Bma14g00810 . 3 613 EIL Transcription Factor Family AT3G20770 61.1 1.1e-204 709.9
Bma08g01187 . 22 469 EIL Transcription Factor Family AT3G20770 60.4 2.9e-149 525.8
Bma14g00784 . 46 385 EIL Transcription Factor Family AT3G20770 53.2 2.9e-93 339.7
Bma14g00784 . 83 288 EIL Transcription Factor Family AT5G65100 61.6 3.1e-70 263.1
Bma14g00810 . 32 298 EIL Transcription Factor Family AT5G10120 57.9 1.9e-84 310.1
Bma08g01187 . 33 286 EIL Transcription Factor Family AT5G10120 56.7 3.0e-82 302.8
Bma14g00784 . 46 290 EIL Transcription Factor Family AT5G10120 53.1 2.9e-69 259.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008299 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 3 3 1 35
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58343 PF04873 EIN3 2.00E-124 No_clan Bma TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g00784 Bma_Chr14 FPKM 43.241116 47.185894 23.680086 22.675875 23.821508 29.420866 22.372446 29.595894 29.94594 27.534445