Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00797 ATGAAAAGCTCATCTATCTCTCTTGACTACAGAGACTATTCAATAAACCTCATAGACTCCCCTGGGCATATGGACTTCTGTAGTGAGGTTTCCACTGCTGCTAGACTCAGCGATGGGGCTTTGGTGCTGGTTGATTCGGTGGAGGGCGTTCACATTCAAACACACGCAGTTTTGCGCCAAGCTTGGATTGAGAAGCTAACACCTTGTTTAGTTCTTAATAAGATTGATAGATTGATTTGTGAGTTGAAGTTGAGCCCCATGGAAGCCTATAACCGATTGTTGAGGATCATTCATGAAGTTAATGGGATTATAAGTGCATATAAGTCGGAGAAGTATTTGTCAGATGTGGATTCGTTACTAGCTGGACCTTTAAGTGATGTAAGCGACGAAAACCTCGAGTATATTGATAACGAGGAGGAGGATACATTTCAACCTCAGAAAGGTAATGTAGTCTTTGTGTGTGCTTTAGATGGTTGGGGTTTTGGAATCAATGAGTTTGCCGAGTTTTATGCATCGAAACTTGGGGCAAGTGTAGCCACTTTGAAGAAGGCGTTGTGGGGGCCTCGTTATTTCAACCCAAAAACAAAGATGATTGTGGGGAAGAAGGGATTAAGTGGTGGAAGTAAAGCTCGGCCGATGTTTGTTCAGTTTGTGCTGGACCGGCTATGGGAAGTGTACAAGGCAGCTTTGGACTCCGATGGGGACAAAGATGTTCTTAGAAAAGTTAATAGCACATTTAATTTGAACGTTCCAGCCCGCGACCTGTCTAACAAGGATCCGAAAGTTGTTCTTCAAGCTATTATGAGCAGGTGGCTTCCTTTGTCCGAGGCAATACTGTCAATGGTTGTGAAGTGCATGCCAGACCCAATTGCAGCACAATCATTTCGAATATCACGTTTGATGCCAAAGCGGGACATTTTGGATGATGAGGGCGATATCAGTGTGCTTACACAGACCGAGGCTGTGAGAAAATCAATCGAGGCTTGTGATTCTGACGTAGAAGCTCCATGCGTTGCTTTTGTGTCCAAAATGTTTGCTGTTCCTATGAAAATGATTCCTCAGAGGGGGCCTCAAGGAGAGATTGTGAGCAATTTGTCTGACAAGGGGGGAGTAGGTGACTCAGATGAGTGTTTTCTAGCATTTGCACGGGTATTTAGCGGCGTACTTTGTTCGGGGCAGAAAATTTTTGTGCTTTCTGCTTTATATGATCCATTACTAGAGGAATCGATGGAGAAGCATGTTCAGGAGGCTGAGTTGCATTCATTGTACTTAATGATGGGGCAAGGCTTAAAACCGGTGAGATCGGTCAAGGCAGGGAATGTTGTGGCCATACGAGGCCTTGGCCAGCATATCTTGAAAAGTGCGACTCTGTCGTCCACAAAAAATTGTTGGCCTTTCTCAAGTATGGAATTTCAAGTTTCTCCAACACTTAGAGTTGCAATCGAACCTTCTGACCCGGCAGATATGGTTGCCCTTTTAAGAGGCTTAAGACTTCTAAATCGAGCAGACCCATTTGTAGAGGTCACTGTTTCTGCTAGAGGGGAACATGTTCTCGCTGCTGCCGGAGAAGTTCATCTCGAGAGATGCATAAAGGATTTGAAAGAGAGATTTGCCAAGGTAAGCTTGGAAGTCTCTCCACCTCTTGTGTCTTATAAAGAGACTATCGAAGGAGAGGTGTCTGGTATAATGGATATAGTGAAATTGTTTAGTGGAAACGCTGATTTTGTTGAAAAAACAACACCAAATGGGCGTTGTGTTGTACGTGTTCAGGTAATGAAGCTTCCGCTTGCGCTCACAAAAGTTCTTGATGAAAATTTTGATATACTCGCAGATATCATTGGAGTAAAAGCCGGACAGAGCAGTAAAGTTTCCGAAAGTAAAAGATCAAGAATTGGACAAAACGAGAGTTCGGTGGAATCAGTTAAAAAGCGTATAATTGATGCCGTGTTTAGCGACATTTCGCAGACAAACGAGAAAGATAACGATGGAGACCGAGCTGACAAATATAAAGCAATGTGGTCAAAACTCCTCCAGAGGATTTGGGCTCTTGGACCTCGGCAGCTTGGTCCAAACTTTCTATTTACCCCAGAGTTTAAAAGGAATGATTCTGAAAATTGCATGCTTGTTCATGGCCCCTCTTATGTATCCGAGAGATTAGGCTTTATAAATGAGACTAGAAATGACAATTTGGATGGTAATGCAGCTCTAGATCTCGACTCGGCTGCTTCAACATCACGAAAAGCATCTCAACCACTATGTATGGAGGCAGAGAGTTTTGAGAGCAGTGTTGTATCTGGGTTTCAGTTGGCTACATCGGCCGGACCTTTATGTGAAGAACCAATGTGGGGCTTGGGATTTATTGTCGAAGCCTATGTTTATCCATCAACTGATCACCCACATGAACTTGAAACGTCCATACTCTCTGATCAGCGAGGAATTTTCACCGGACAAGTTATGACAGCAGTCAAAGAGGCTTGTAGAAGTGCTCTACTTCAAAAGAAGCCTCGGCTGGTTGAAGCCATGTACTTTTGCGAATTGAGCACACCCACTGAATATCTCGGACCCATGTATGCTGTGCTGGCCCGAAGGCGGGCCCGTGTTTTGAAGGAAGAAATGCAAGAAGGTTCGTCTTTGTTTTCCGTCCATGCATATGTGCCGGTTTCCGAGAGCCTCGGCTTTGCAGACGAGTTAAGAAGATGGACATCTGGAGCAGCTAGTGCTCTCCTTGTGCTTAGCCATTGGGAAGCACTTCCTGAAGATCCTTTCTTTGTACCCAAGACGGAAGAAGAAATCGAAGAGTTTGGAGACGGTTCGAGTGTGCTTCATAATACGGCCCGGAAGCTCATAGATGCAGTCAGAAGGCGAAAAGGTCTTCCCGTTGAAGAAAAAGTCGTCCAACACGCAACGAAGCAGAGGACTTTGGCCCGGAAAGTGTAA 2937 44.6 MKSSSISLDYRDYSINLIDSPGHMDFCSEVSTAARLSDGALVLVDSVEGVHIQTHAVLRQAWIEKLTPCLVLNKIDRLICELKLSPMEAYNRLLRIIHEVNGIISAYKSEKYLSDVDSLLAGPLSDVSDENLEYIDNEEEDTFQPQKGNVVFVCALDGWGFGINEFAEFYASKLGASVATLKKALWGPRYFNPKTKMIVGKKGLSGGSKARPMFVQFVLDRLWEVYKAALDSDGDKDVLRKVNSTFNLNVPARDLSNKDPKVVLQAIMSRWLPLSEAILSMVVKCMPDPIAAQSFRISRLMPKRDILDDEGDISVLTQTEAVRKSIEACDSDVEAPCVAFVSKMFAVPMKMIPQRGPQGEIVSNLSDKGGVGDSDECFLAFARVFSGVLCSGQKIFVLSALYDPLLEESMEKHVQEAELHSLYLMMGQGLKPVRSVKAGNVVAIRGLGQHILKSATLSSTKNCWPFSSMEFQVSPTLRVAIEPSDPADMVALLRGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCIKDLKERFAKVSLEVSPPLVSYKETIEGEVSGIMDIVKLFSGNADFVEKTTPNGRCVVRVQVMKLPLALTKVLDENFDILADIIGVKAGQSSKVSESKRSRIGQNESSVESVKKRIIDAVFSDISQTNEKDNDGDRADKYKAMWSKLLQRIWALGPRQLGPNFLFTPEFKRNDSENCMLVHGPSYVSERLGFINETRNDNLDGNAALDLDSAASTSRKASQPLCMEAESFESSVVSGFQLATSAGPLCEEPMWGLGFIVEAYVYPSTDHPHELETSILSDQRGIFTGQVMTAVKEACRSALLQKKPRLVEAMYFCELSTPTEYLGPMYAVLARRRARVLKEEMQEGSSLFSVHAYVPVSESLGFADELRRWTSGAASALLVLSHWEALPEDPFFVPKTEEEIEEFGDGSSVLHNTARKLIDAVRRRKGLPVEEKVVQHATKQRTLARKV 978
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8929788 8932724 + Bma011272.1 Bma14g00797 94778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00797 978 Pfam Elongation factor Tu domain 2 379 457 IPR004161 GO:0005525
Bma14g00797 978 Gene3D - 572 833 IPR014721 -
Bma14g00797 978 SUPERFAMILY EF-G C-terminal domain-like 473 547 IPR035647 -
Bma14g00797 978 SUPERFAMILY Ribosomal protein S5 domain 2-like 549 838 IPR020568 -
Bma14g00797 978 CDD EF2_II 336 460 - -
Bma14g00797 978 Gene3D Yeast translation eEF2 (G' domain) 163 272 - -
Bma14g00797 978 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 977 - -
Bma14g00797 978 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 287 IPR027417 -
Bma14g00797 978 Pfam Elongation factor Tu GTP binding domain 1 277 IPR000795 GO:0003924|GO:0005525
Bma14g00797 978 Pfam Elongation factor G C-terminus 837 921 IPR000640 -
Bma14g00797 978 CDD aeEF2_snRNP_like_IV 546 843 - -
Bma14g00797 978 Gene3D Elongation Factor G (Translational Gtpase), domain 3 474 550 - -
Bma14g00797 978 Gene3D Translation factors 289 472 - -
Bma14g00797 978 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 178 IPR000795 GO:0003924|GO:0005525
Bma14g00797 978 SUPERFAMILY EF-G C-terminal domain-like 839 939 IPR035647 -
Bma14g00797 978 SUPERFAMILY Translation proteins 327 469 IPR009000 -
Bma14g00797 978 CDD eEF2_snRNP_like_C 839 918 - -
Bma14g00797 978 Gene3D - 1 150 IPR027417 -
Bma14g00797 978 SMART EFG_C_a 836 925 IPR000640 -
Bma14g00797 978 Gene3D - 835 970 - -
Bma14g00797 978 PANTHER - 1 977 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00676 Bma-Chr12:28181679 Bma14g00797 Bma-Chr14:8929788 2.98E-24 dispersed
Bma14g00797 Bma-Chr14:8929788 Bma10g00205 Bma-Chr10:1821031 2.49E-11 dispersed
Bma14g00797 Bma-Chr14:8929788 Bma01g00285 Bma-Chr1:2391105 1.28E-27 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00797 K14536 - zju:107410537 1470.29