Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma14g00801 | ATGGCTGTTGTTGCCTTCTCCGATCTCCATACTGAAGCTGGCTTGAAATCGCTTGATGAGTTCCTCTCTGGAAAATCTTACATCTCCGGGGACAAGCTATCTAAGGATGATATAAAGGTTTTCGCGGTTATTTCTGTCAGGCCGTCTGATTCCTTTCCTAATGCTGCTAGTTGGTATGACTGTATCACTTCTCATCTTGCCCCAAGTTTCCCTGGAAAAGCTACCGGTGTCAGAGTCGGTGGTAAGGCTCCCGCTTTGAGAGATGCCCCGGCAGAGAAACTTAAGGAGGATGTTGCTGCTGAAGAAGATGACGACGACCTTGATCTCTTTGGAGATGAAACGGAAGAGGAGAAGAAAGTAGCAGAAGAGAGGGAGGCAGCCAAAAAATCATCTGGCAAGAAGAAAGAGAGTGGAAAATCGTCTGTTCTTTTGGATGTAAAACCATGGGATGATGAAACAGACATGAAGAAACTAGAAGAGGCGGTTCGCAGTATTGAGATGCCTGGTCTCTTGTGGGGTGCATCCAAACTTATGCCAGTTGGATATGGAATAAAGAAGCTGCAAATTATGCTCACCATTGTTGATGATCTCGTTTCGGTCGATTCCCTTATCGAGGAACAGCTGACCGTCGAACCGTGCAACGAGTACATCCAAAGCTGTGACATTGTTGCCTTCAACAAAATCTAA | 687 | 45.85 | MAVVAFSDLHTEAGLKSLDEFLSGKSYISGDKLSKDDIKVFAVISVRPSDSFPNAASWYDCITSHLAPSFPGKATGVRVGGKAPALRDAPAEKLKEDVAAEEDDDDLDLFGDETEEEKKVAEEREAAKKSSGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSIEMPGLLWGASKLMPVGYGIKKLQIMLTIVDDLVSVDSLIEEQLTVEPCNEYIQSCDIVAFNKI | 228 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 8956557 | 8958796 | + | Bma011276.1 | Bma14g00801 | 94782 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma14g00801 | 228 | CDD | EF1B | 142 | 228 | IPR014038 | GO:0003746|GO:0006414 | |
Bma14g00801 | 228 | Pfam | EF-1 guanine nucleotide exchange domain | 141 | 228 | IPR014038 | GO:0003746|GO:0006414 | |
Bma14g00801 | 228 | MobiDBLite | consensus disorder prediction | 113 | 135 | - | - | |
Bma14g00801 | 228 | PANTHER | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER | 4 | 228 | - | - | |
Bma14g00801 | 228 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 2. | 217 | 228 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 | |
Bma14g00801 | 228 | PANTHER | ELONGATION FACTOR 1-BETA 2 | 4 | 228 | - | - | |
Bma14g00801 | 228 | Gene3D | - | 132 | 228 | IPR014717 | - | |
Bma14g00801 | 228 | SMART | EF1_GNE_2 | 139 | 228 | IPR014038 | GO:0003746|GO:0006414 | |
Bma14g00801 | 228 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 1. | 103 | 111 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 | |
Bma14g00801 | 228 | MobiDBLite | consensus disorder prediction | 98 | 112 | - | - | |
Bma14g00801 | 228 | MobiDBLite | consensus disorder prediction | 77 | 135 | - | - | |
Bma14g00801 | 228 | SUPERFAMILY | GST C-terminal domain-like | 10 | 64 | IPR036282 | - | |
Bma14g00801 | 228 | SUPERFAMILY | eEF-1beta-like | 136 | 228 | IPR036219 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g01258 | Bma-Chr3:21187580 | Bma14g00801 | Bma-Chr14:8956557 | 9.40E-80 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma14g00801 | K03232 | - | pvy:116144307 | 311.997 |