Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00810 ATGATGATGATGTTTGAGGAGATGGGATTTTGTGGCGACTTGGATTTTCTGTCTGCACCTCCTGGAGAAGGAGATATGGCTGCTCCACAGACTGAACCTGAAGCTACTGTGGACGATGATTATTCAGATGAAGAGATCGATGTTGATGAGCTCGAGAGGAGGATGTGGAGGGACAAAATGCGTCTGAAACGGCTGAAAGAGCAGAGCAAAGGGAAGGAAGGGATCGATATGGCAAAACAGCGCCAATCTCAAGAACAAGCGAGGAGGAAGAAGATGTCTAGGGCCCAAGATGGGATCTTGAAGTACATGTTGAAGATGATGGAAGTTTGCAAAGCTCAAGGGTTTGTTTATGGGATTATTCCAGAGAAGGGGAAACCCGTTACTGGAGCATCGGATAATCTCCGAGAATGGTGGAAAGATAAAGTGAGATTTGATCGAAACGGACCGGCTGCCATAGCCAAGTACCAAGCCGACAACGCAATTCCGGGCAAAAACGAAGGCTGCAATTCAATTGGTCCAACTCCTCACACCCTGCAAGAACTTCAAGACACTACTCTAGGATCTCTCTTATCGGCGCTAATGCAGCATTGTGATCCGCCCCAGAGGCGGTTTCCGTTGGAGAAAGGCATTCCTCCTCCGTGGTGGCCGACTGGAAACGAGGACTGGTGGCCCCAATTGGGTTTGCAGAAAGATCAAGGCGGTCCACCTTATAAGAAGCCTCATGATTTGAAGAAAGCGTGGAAAGTGGGTGTTCTCACTGCAGTTATTAAGCATATGTCTCCTGATATTGCTAAGATTCGAAAGCTTGTGAGGCAGTCCAAGTGCCTGCAGGACAAGATGACTGCCAAAGAGAGTGCAACTTGGCTTGCCATTATCAACCAGGAGGAGGTCCTGGCGCGAGAGCTTTACCCTGGCTGTTGCCCTCCTCTGTCGTCAAATGGCGGAAGTGGGTCTTTGGTCATTAATGATTGCACTGAATATGACGTTGAAGGAGCAGAAAACGAGCCGAACTTCGACGTGCAGGATTCCAAACCGGAAAATCTCAGTTCGATCGGTTTAGGACTGGAGAGAACTCGAGATAGGCTTCCTATTCTACATTCAACTTATCCAATCAAAGGAGAAGTTGTTACAAACTTAGATTTTGCGAGGAAAAGAAAGCCGACCAGTGATTTAAACACCATGACTGATCAAAAAATCTATACTTGTGAGTTTCTTCAATGTCCTTACAGTGAGTCTCGACTCCGCTTTCATGACAGGACTTCTAGGGACAATCATCAAATGTCTTGCCCATATCGGACTTCTTCGGACTTTGGGAGTTCAAATGTCCAATTCAACGAAGTTAAGCCAGTCATCTTCCAGCCATCTTTCGTCCAGTGCAAGCCGCCTCCTCCCACTTTCGACTTATCCGGGCTTGGAGTTCCAGAAGAGGGGCAGAAGCTGATAAGTGAGCTCATGTCAGTCTACGATACTAATGTTCAAGGCGGCAAGAACTCAAATACAGGTCCAAATGCAATGACCGATAATCAAGCTGTTTGTCAGCCGAAGATTCATCATCAGCCAAACGAATTCTTCGGAAATCAAGGTGGTGTTATTATGGAAGGCAACTTCTACCCAGAAGCCAATATTTCGATTAATCATCAGATGGTATGTCGGGAGGGAGGAGGTCAATTCGATCGATTCAAGCCGTTAAACTCTCCCTTCGAGACCAACAATGGCAGCAATAACTTCCAGTTGATGTTTGGATCGCCATTCGAATTATCATCGTTCAACTACAAAGAAGATGTAGGGGGAGTGGCGATCAATCCGCCCCCGAAGCACCAAGATATTCCAATCTGGTACCAGTAA 1845 46.83 MMMMFEEMGFCGDLDFLSAPPGEGDMAAPQTEPEATVDDDYSDEEIDVDELERRMWRDKMRLKRLKEQSKGKEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGKNEGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGIPPPWWPTGNEDWWPQLGLQKDQGGPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEVLARELYPGCCPPLSSNGGSGSLVINDCTEYDVEGAENEPNFDVQDSKPENLSSIGLGLERTRDRLPILHSTYPIKGEVVTNLDFARKRKPTSDLNTMTDQKIYTCEFLQCPYSESRLRFHDRTSRDNHQMSCPYRTSSDFGSSNVQFNEVKPVIFQPSFVQCKPPPPTFDLSGLGVPEEGQKLISELMSVYDTNVQGGKNSNTGPNAMTDNQAVCQPKIHHQPNEFFGNQGGVIMEGNFYPEANISINHQMVCREGGGQFDRFKPLNSPFETNNGSNNFQLMFGSPFELSSFNYKEDVGGVAINPPPKHQDIPIWYQ 614
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9026124 9027968 + Bma011285.1 Bma14g00810 94791

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00810 614 Gene3D - 173 306 IPR023278 GO:0003700|GO:0005634
Bma14g00810 614 Gene3D - 81 158 IPR023278 GO:0003700|GO:0005634
Bma14g00810 614 MobiDBLite consensus disorder prediction 20 43 - -
Bma14g00810 614 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 2 613 - -
Bma14g00810 614 Coils Coil 48 68 - -
Bma14g00810 614 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 2 613 IPR006957 GO:0005634
Bma14g00810 614 SUPERFAMILY DNA-binding domain of EIN3-like 175 299 IPR023278 GO:0003700|GO:0005634
Bma14g00810 614 MobiDBLite consensus disorder prediction 65 92 - -
Bma14g00810 614 Pfam Ethylene insensitive 3 49 296 IPR006957 GO:0005634
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00810 K14514 EIN3; ethylene-insensitive protein 3 - qsu:111991923 981.089
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g01187 Bma-Chr8:50764292 Bma14g00810 Bma-Chr14:9026124 0 transposed
Bma14g00784 Bma-Chr14:8747331 Bma14g00810 Bma-Chr14:9026124 2.87E-128 transposed
Bma14g00810 Bma-Chr14:9026124 Bma07g01339 Bma-Chr7:48924782 8.83E-30 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bma14g00810 . 2 613 EIL Transcription Factor Family AT2G27050 60.6 6.7e-193 670.6
Bma08g01187 . 1 481 EIL Transcription Factor Family AT2G27050 56.6 2.6e-144 509.2
Bma14g00784 . 46 365 EIL Transcription Factor Family AT2G27050 56.0 1.6e-93 340.5
Bma14g00784 . 78 328 EIL Transcription Factor Family AT5G21120 52.5 6.2e-73 271.9
Bma14g00784 . 46 576 EIL Transcription Factor Family AT1G73730 51.9 1.9e-136 483.0
Bma14g00810 . 40 333 EIL Transcription Factor Family AT1G73730 62.9 5.0e-105 378.6
Bma08g01187 . 28 323 EIL Transcription Factor Family AT1G73730 56.8 3.3e-96 349.4
Bma14g00810 . 3 613 EIL Transcription Factor Family AT3G20770 61.1 1.1e-204 709.9
Bma08g01187 . 22 469 EIL Transcription Factor Family AT3G20770 60.4 2.9e-149 525.8
Bma14g00784 . 46 385 EIL Transcription Factor Family AT3G20770 53.2 2.9e-93 339.7
Bma14g00784 . 83 288 EIL Transcription Factor Family AT5G65100 61.6 3.1e-70 263.1
Bma14g00810 . 32 298 EIL Transcription Factor Family AT5G10120 57.9 1.9e-84 310.1
Bma08g01187 . 33 286 EIL Transcription Factor Family AT5G10120 56.7 3.0e-82 302.8
Bma14g00784 . 46 290 EIL Transcription Factor Family AT5G10120 53.1 2.9e-69 259.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001004 3 9 2 2 3 2 4 2 2 1 2 2 4 2 2 4 2 6 4 2 2 2 2 2 2 2 2 3 4 2 83
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58345 PF04873 EIN3 1.70E-130 No_clan Bma TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g00810 Bma_Chr14 FPKM 0.449902 0.393114 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0