Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00847 ATGTCCACCATTAAAGCATATGCGAAGTTCAATGAAGCCGAGCAGATGATGCTCGATGCTCGCCGGAGTACCAGAAAGAGAATTGTCATTATCGTTTTATCTTCTGTTGTTCTCGTGGGCGTTGTTCTAGCTGCTGTTTTTGGAACTGCAAGCTCCAGAAATGGAGGAAAATCTAACAATGGTGGAAGCCCTAACCCTCTCTCTACCTCTATTAAAGCAGTCTGCGACGAGACTGTGTACCCAGATAGCTGTTACAGCGCTCTCAATCCTTTGAAAAACTCGAGTCGCCTCACGCCGCAGGAGATTTCGAAGACGATAATTCAGGCCGCAATTAATGAGCTATCAGAAGTTTCAGGCTACATTTTCGACGACGCTATAAAGAACTCTACTGATAACATGACGATTCAAGCTTTGAAAAACTGCGAGGAGCTTCTGGATTTAGCTCTAGACCACTTGAATATGTCTCTCTCCTCGTCGGACGCCTCTCTAACTGACACCATTGATGACCTCCGAACATGGCTGAGCTCCGCGACAACGCATCAACAAACCTGCATAGATGGGTTGGAAGACGTTAATGAAGCATTGAAAAATTCCATTTCCGGGTACTTGAGAAACTCAACTGAATACTCAAGCAACGGGCTGGCCATCGTCACGTGGCTGTCGAGCTTCACGGGGTCTCTGAAACTCCGGCGACTAATGGGGGAGCCGGAGTGGGTGAGCCCGGCGACGAGGCGGCTGTTGCAGAGCGATTTGAAGAACCAGGCGGATATAGTGGTGGCCAAAGATGGGTCGGGGAAGTACAAGACGATAAAGGCGGCGCTGAAGGCGGTGCCGGAAAAAAGCAAGAAGACGACAGTGATATACGTGAAGAAGGGGATTTACTACGAGAATGTGATAGTGGACAAGACGATGTGGAATGTGGTTATGGTCGGAGATGGAATGACTTCCACCATTGTTTCTGCAAGTCTGAACTTCGTTGACGGCACTCCTACTTTCTCCTCTGCAACTTTCGCTGCAATGGGGCAAAACTTCATAGCAAGAGACATGGGTTTCCGCAACACCGCCGGAGCAAGCAAGCACCAAGCCGTCGCCCTAATGTCCACCTCCGATCAATCCATCTTCTACCGCTGCCTCTTCGACGCCTACCAAGACACTCTCTACACCCATTCCAACCGCCAGTTCTACCGGGAATGCAACATCTACGGCACCGTCGATTTCATCTTCGGAAACTCCGCCGTCGTCATCCAAAGTTCCTTCATATTCCCCCGATTGCCGATGAAAGGCCAGCAAAACACGATCACGGCTCAGGGAAAGTTTGATCCCAATCAAAACACGGGCATTTCGATTCAAAAGTGTTCGGTCATGCCGTTCGGAAACCTAGGTTCTACTCAAACATACCTCGGTCGGCCGTGGAAGAACTACTCGACGACCGTTTATATTCAGAATAATCTGGGGTCTTTGATTAACCCCGCCGGATGGTTACCATGGGTCGGCGATTCGGCTCCGAGCACCATCTTCTACGCCGAGTTTCAGAATTTCGGAGCTGGGTCTTCGACTGCGAAGAGAGTGAAGTGGAAGGGAGTAAGGAATATTAATGGAGCTCAGGCGAGTAAGTTTACGGTTTCTTCGTTTCTTCAAGGCGGGAAGTGGATTTCGCCCGCCGGAGTTCCTTTCGAAGCCGGTCTGTAA 1689 49.79 MSTIKAYAKFNEAEQMMLDARRSTRKRIVIIVLSSVVLVGVVLAAVFGTASSRNGGKSNNGGSPNPLSTSIKAVCDETVYPDSCYSALNPLKNSSRLTPQEISKTIIQAAINELSEVSGYIFDDAIKNSTDNMTIQALKNCEELLDLALDHLNMSLSSSDASLTDTIDDLRTWLSSATTHQQTCIDGLEDVNEALKNSISGYLRNSTEYSSNGLAIVTWLSSFTGSLKLRRLMGEPEWVSPATRRLLQSDLKNQADIVVAKDGSGKYKTIKAALKAVPEKSKKTTVIYVKKGIYYENVIVDKTMWNVVMVGDGMTSTIVSASLNFVDGTPTFSSATFAAMGQNFIARDMGFRNTAGASKHQAVALMSTSDQSIFYRCLFDAYQDTLYTHSNRQFYRECNIYGTVDFIFGNSAVVIQSSFIFPRLPMKGQQNTITAQGKFDPNQNTGISIQKCSVMPFGNLGSTQTYLGRPWKNYSTTVYIQNNLGSLINPAGWLPWVGDSAPSTIFYAEFQNFGAGSSTAKRVKWKGVRNINGAQASKFTVSSFLQGGKWISPAGVPFEAGL 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9437581 9439359 + Bma011326.1 Bma14g00847 94828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00847 562 PANTHER PECTINESTERASE 5 560 - -
Bma14g00847 562 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 70 221 IPR035513 -
Bma14g00847 562 Gene3D Invertase/pectin methylesterase inhibitor family protein 68 222 IPR035513 -
Bma14g00847 562 TIGRFAM PME_inhib: pectinesterase inhibitor domain 54 220 IPR006501 GO:0004857
Bma14g00847 562 Gene3D - 251 562 IPR012334 -
Bma14g00847 562 CDD PMEI-like_3 73 222 - -
Bma14g00847 562 Pfam Plant invertase/pectin methylesterase inhibitor 70 216 IPR006501 GO:0004857
Bma14g00847 562 PANTHER PECTINESTERASE 5 560 - -
Bma14g00847 562 SMART PMEI_2 66 216 IPR006501 GO:0004857
Bma14g00847 562 Pfam Pectinesterase 256 547 IPR000070 GO:0030599|GO:0042545
Bma14g00847 562 SUPERFAMILY Pectin lyase-like 254 561 IPR011050 -
Bma14g00847 562 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g01193 Bma-Chr13:45200804 Bma14g00847 Bma-Chr14:9437581 7.89E-87 dispersed
Bma14g00847 Bma-Chr14:9437581 Bma15g00533 Bma-Chr15:6156349 2.29E-120 dispersed
Bma01g00630 Bma-Chr1:5694230 Bma14g00847 Bma-Chr14:9437581 2.20E-141 transposed
Bma06g00801 Bma-Chr6:41239618 Bma14g00847 Bma-Chr14:9437581 5.97E-130 transposed
Bma13g00619 Bma-Chr13:14730685 Bma14g00847 Bma-Chr14:9437581 9.96E-150 transposed
Bma01g01544 Bma-Chr1:34984686 Bma14g00847 Bma-Chr14:9437581 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00847 - - mcha:111010791 735.332