Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00933 ATGGCTGCTTCTTCTATGGCTCTTTCTTCACCATCTTTCGCCGGGAAAGCAGTCAAGCTCTCTCCCTCTGCTCCCGAAATTGTCGGAAATGGCAGAGTCAGCATGAGGAAGACGGGCGGTAGACCTGCATCCTCCGGCAGCCCATGGTACGGCCCCGACCGTGTAAAGTATTTGGGTCCATTCTCCGGAGATGCTCCCTCCTACCTGAAAGGAGAATTCCCAGGAGATTATGGATGGGACACTGCCGGGCTCTCAGCCGACCCAGAGACCTTCGCCAAGAACCGGGAGCTGGAAGTCATCCACGCTCGGTGGGCCATGCTCGGGGCCCTCGGCTGCGTCTTCCCGGAGCTGCTATCCCGGAACGGCGTGAAGTTCGGAGAGGCCGTGTGGTTCAAGGCGGGATCACAGATCTTCAGCGAGGGGGGTCTTGACTACCTGGGCAACCCGAGTTTGGTCCACGCTCAGAGCATCCTTGCCATCTGGGCTTCTCAAGTAATCTTGATGGGCGCCGTCGAAGGCTACCGTGTTGCCGGAGGGCCACTCGGAGAAGTCACCGACCCAATCTACCCAGGCGGTTCGTTCGACCCGTTGGGTCTGGCTGACGACCCGGAGGCATTCGCAGAGCTGAAAGTGAAGGAGTTAAAGAACGGAAGGCTAGCCATGTTTTCCATGTTCGGATTCTACGTTCAGGCCATCGTCACCGGAAAGGGACCTCTTGAAAACCTCGCCGATCACCTTGCCGACCCTGTCAACAACAATGCCTGGGCTTACGCCACCAACTTTGTTCCCGGAAAGTGA 798 57.89 MAASSMALSSPSFAGKAVKLSPSAPEIVGNGRVSMRKTGGRPASSGSPWYGPDRVKYLGPFSGDAPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFYVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10657380 10658177 + Bma011424.1 Bma14g00933 94914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00933 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
Bma14g00933 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Bma14g00933 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Bma14g00933 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 265 - -
Bma14g00933 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00951 Bma-Chr11:42443230 Bma14g00933 Bma-Chr14:10657380 0 dispersed
Bma14g00933 Bma-Chr14:10657380 Bma14g00970 Bma-Chr14:11191205 0 dispersed
Bma14g00969 Bma-Chr14:11189078 Bma14g00933 Bma-Chr14:10657380 2.97E-114 dispersed
Bma14g00933 Bma-Chr14:10657380 Bma14g00934 Bma-Chr14:10659609 5.44E-171 tandem
Bma10g00936 Bma-Chr10:19395776 Bma14g00933 Bma-Chr14:10657380 1.22E-165 transposed
Bma14g01769 Bma-Chr14:38041790 Bma14g00933 Bma-Chr14:10657380 1.72E-162 transposed
Bma14g02131 Bma-Chr14:44960066 Bma14g00933 Bma-Chr14:10657380 0 transposed
Bma01g01496 Bma-Chr1:29519144 Bma14g00933 Bma-Chr14:10657380 5.30E-162 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00933 K08912 - rcu:8289767 514.998